Gene Psyc_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1186 
SymbolpheA 
ID3514084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1422416 
End bp1423597 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content46% 
IMG OID637669875 
Productprephenate dehydratase 
Protein accessionYP_264471 
Protein GI71065744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.343107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC AGTCACCAGA ACAAAAAAAT GATAATCTAA ACCAAACCAC CGCAAGCAAC 
AGCGCTACAG CAACGGATAA AGAGTTTTTA AATACATTGC GAGGCAGTAT CGATGCGGTA
GACTGCGAAA TTCAGACGCT GATTAACAAT CGTGCCAAAT TGGCTCAGCA AGTGGCGACC
GTGAAAAAAA ATCACATTGC CAATGATCCT GCTGCTGAAA ATACCAACCC TATTTTTTAT
CGTCCAGAGC GTGAGGCGCA AGTTTTAAAA GCCGTCATGG AGCGTAATAC CGGACCTATC
GCCGATGAAA AAATGGCACG TTTGTTCCGT GAGATTATGT CGGTATGCCT TGATTTAGAA
GCGCCGCAGC GCATTGCATT TTTGGGTCCA GTAGGTACTT TTACCCATGC CGCTGCATTA
AAACACTTTG GCAAAGCTGC GGATACTGTA CCGCTCAATA CTATCACTGA TGTCTTTCGT
GAAGTCGAAG CGGGCACAGC AATGTATGGC GTCGTGCCCG TTGAAAACTC ATCTGAGGGC
GTCGTTAATC ATACGTTAGA TGGCTTTTTA TCCTCTACTC TAAAAATAAT CGGTGAAGTT
GAGCTGCCGA TTCATCAAAA CTTTTTGGTC GCTGAGCATA CCAAGATTGA CGGGTTAAGC
CGTATCTACT CGCACCAGCA ATCGTTAGCA CAGTGTCGTC ACTGGCTTGA TGTGAATTTC
CCCAATGTCG AGCGTGTTGC GGTATCGAGT AATGGTGAAG CGGCACGTCG CTTGAAGAAT
GAGTGGCATT CAGCAGCGAT TGCAGGTGAC GTGGCGGCTG CAGAGTATGA TTTGCATAAG
CTGTATTCAA ATATCGAAGA CAATCCAAGT AATACTACTC GTTTCTTGAT TATTGGTCAC
GAAGCGATAG AGCCATCAGG TCAAGACAAA ACCTCGATTA TGGTGTCAGC GCATGACAAA
GCGGGTGCTC TGATCGAAAT CTTAAAACCT TTATCGTATC ATGGCGTGTC GATGACCAGT
ATTGAAACGC GTCCTGAGCG TCCTAATAAG TGGGCTTACG TTTTCTTTAT CGATATTAAT
GGGCACATTG CAGACCCAAA TGTGAGCGCC GCTATCGCTG ATATCCGCCC ATTGGTCAAA
GATTTACGTG TATTGGGCTC TTATCCAAAA GCGGTACTAT AA
 
Protein sequence
MSEQSPEQKN DNLNQTTASN SATATDKEFL NTLRGSIDAV DCEIQTLINN RAKLAQQVAT 
VKKNHIANDP AAENTNPIFY RPEREAQVLK AVMERNTGPI ADEKMARLFR EIMSVCLDLE
APQRIAFLGP VGTFTHAAAL KHFGKAADTV PLNTITDVFR EVEAGTAMYG VVPVENSSEG
VVNHTLDGFL SSTLKIIGEV ELPIHQNFLV AEHTKIDGLS RIYSHQQSLA QCRHWLDVNF
PNVERVAVSS NGEAARRLKN EWHSAAIAGD VAAAEYDLHK LYSNIEDNPS NTTRFLIIGH
EAIEPSGQDK TSIMVSAHDK AGALIEILKP LSYHGVSMTS IETRPERPNK WAYVFFIDIN
GHIADPNVSA AIADIRPLVK DLRVLGSYPK AVL