| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1185 |
|---|
| Symbol | hisC |
|---|
| ID | 3514083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1421132 |
|---|
| End bp | 1422274 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637669874 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_264470 |
|---|
| Protein GI | 71065743 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.318294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCTA CGCAATCGAC AGAGTCAAAC TTATTACCGC TCGTACCTGC TTATGACAGT
ATTTTGGCGT TGGCGCCGTA TCAAACTGGC AAGCCTATTG AAGAATTAAC GCGTGAGTAT
GGCGTCTCAG ATGTGGTAAA ACTTGCCAGT AATGAGAATC CGATAGGCTG CTCACCGCAC
GTCACGCTAG CGATTACTGA GCAGATAGGT CAGCTGTCAC GTTATCCTGA TGGCAATGGC
TATTATCTAA AGCAAGCGTT GGCTGATTTT AATGACGTCA ATGTTGATCA GATTACTTTG
GGTAATGGCT CTGATGATTT GCTCGATATC TTGGCGCGTA GTTTTGTGGG TGCGGATGAT
GCAATCGTTT ATAGTCAGTA TGCCTTTGTG GTCTATTCGA TGTTGGCAAA AATGCAAGGT
GCTATGGATG TTGAAGTTCC TGCTCAGCGC TTTGGACACG ACCTAAAAGC CATGAGTCAA
GCGATTGAGA ATAACTCCAA TACCAAAATC GTCTTTATTG CCAATCCGAA CAATCCAACC
GGTACCCAGC TTGAACATGG TGAGCTGAGA GAGTTTGTTG CCAGTGTGCC AAGCTCGGTA
CTGGTGGTAT TAGATGAGGC TTATATCGAA TATAGTCCTG AGAGTAATAA TCGGGCACTG
TTAGATGAAT TTGATAATGT GGTCATCGTC CGCACCTTTT CTAAAGCTTA TGGGCTGGCA
GGTCTGCGTG TCGGCTATGC GTTAAGCTCG GCAGCTGTGG CAGATTTACT CAATCGTATT
CGTCAGCCAT TTAATGTTAG TAGAGTAGCG CTCGCGGCAG CAGCAGCGGC ACTTGCGGAT
CAAGACTTTA TCGAAAAAAC TCGGCTGATA AATGACGAGC AGATGCATTG GTTAGAAAAA
CAGTTTGATG CACTGGGATT GGGTTTCATT AAGTCACATG CCAACTTTAT TATGGTCGAA
ATCGCAGTTG AAATGGAAGA TACAAACGCT GCTGTTATTT ATCAGGCCTT ACTTGAGCAA
GGCGTTATCG TGCGCCAGCT GGAGGTTTAT GGCTTGTATA ATTGGTTGCG AATTAGTGTA
GGGGTCGCAG AAGACAATAT GCGTTTGATT GATACTCTGC GTTCTATTTT GACCGATGAT
TAA
|
|---|
| Protein sequence | MQSTQSTESN LLPLVPAYDS ILALAPYQTG KPIEELTREY GVSDVVKLAS NENPIGCSPH
VTLAITEQIG QLSRYPDGNG YYLKQALADF NDVNVDQITL GNGSDDLLDI LARSFVGADD
AIVYSQYAFV VYSMLAKMQG AMDVEVPAQR FGHDLKAMSQ AIENNSNTKI VFIANPNNPT
GTQLEHGELR EFVASVPSSV LVVLDEAYIE YSPESNNRAL LDEFDNVVIV RTFSKAYGLA
GLRVGYALSS AAVADLLNRI RQPFNVSRVA LAAAAAALAD QDFIEKTRLI NDEQMHWLEK
QFDALGLGFI KSHANFIMVE IAVEMEDTNA AVIYQALLEQ GVIVRQLEVY GLYNWLRISV
GVAEDNMRLI DTLRSILTDD
|
|---|
| |