Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1184 |
Symbol | |
ID | 3514082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1418677 |
End bp | 1421013 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669873 |
Product | bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_264469 |
Protein GI | 71065742 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase [COG0287] Prephenate dehydrogenase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.372461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTAGCC AACAGAAAAC CCAACAGTAT AAAAATTTAG CCCTTTTAAA TGCTCAGTCG CCACTATTTA ATCAAGTTTG TGTGATTGGG CTTGGATTGA TAGGGGCAAG TATTGCTCAA GCCATTAAAA ACAATGGTTT GGCTGAACGT ATCGTTGCAG TTGATAGACA CGAGCCAAGT CTAAAGGAAG CTATCCAACA CGGTTTGCTA GACGCTGGTA GTGTCGTCTT AAGTGAAATT GTATCTGGCA GTGACTTGAT TATCATTGCG GTGCCAGCAC AAGCGGTGCA AGCGGTATTT ATAGATATCA AAAATGCAAT GGACAGTGGT TTGCTTGCTA CTGATTGCAT TATTACCGAT GTCTGCAGTA CTAAAGTCAA TATCATTGAC GCTGCCAAAG CGGTGTTTGA GACATTGCCT GTAGGGCTTG TGCCTGCACA TCCGATTGCC GGTGCTGAAA ATTCGGGGTA TCATGCACGC CGCGCCACAT TGTTTGTTAA TCATAGCGTT ATTATCTGTG AGCTACCAAC GACCAGTCAT CTGGCAATTG CAAAGCTAAG CCAATTATGG GAAGCGGTAG GGGCTAGCGT CATGCCGATG GAGGCCGCGC ATCACGATGC GATATTGGCA CATACCAGTC ATTTGCCGCA TCTGTTGGCG TTCAATCTGG TTGAGCAACT GGCAAGTCAT GATGATAATC TAGATATGTT CCGCTATGCC GCAGGTGGCT TTCGTGACTT TACGCGCATT GCTGCCAGCG ACCCTAAAAT GTGGCATGAT ATATTTTTTG CCAACCAAAG CGCGATTATA AGCGCCCTTG ATGAGTACAG CGTTTATTTA AGCGATATAC GTCAGCTTAT CATTGATAAA AATTCAACCG CCCTGATGGG ACTTTTGGGC CGCGCGCAAG CCGCACGGCG ACATTTTGGC CATATGTTAG CCAGCACCCC TTATACGGAT ACTTCTGCCA TGTCAGCTTC TTATAATATT ACCCCAAGCA ACACTGTCTC TGGCACTATT ACCATTCCTG GTGATAAATC TATCTCCCAT CGTAGTATTA TGCTCGGTAG CCTTGCAACC GGTGTGACCC ACGTCACTGG ATTTTTGGAA GGGGAAGATG CTTTAGCTAC TTTGCAGGCT TTTCGTGATA TGGGCGTGAT CATTGAAGGT CCTGACAATG GTAATTTAAC CATTCATGGC GTTGGTATGA ATGGCTTGAA GCCAAGCAAA ACGCCACTAT ATATGGGCAA TTCTGGTACC AGTATGCGTC TGCTAGCAGG TATTTTAGCC GCGCAAGCGT TTGATAGCGT ACTGACAGGT GATACCAGCT TGAACAAACG CCCAATGGAG CGTATAGCAG CGCCATTACG TCAAATGGGT GCAGTCATTC AAAGTACGGG TCAAAAAGGC ACTGCGCCGC TCAGTATCAC TGGTCGAGAT AGTGTAGGTA CACCACTACA AGGTATAGAG TATGATATGC CGGTCGCTTC TGCACAGATT AAGTCGTGCT TGCTACTAGC AGGGTTGTGG GCTGAGGGCA CGACGACTGT TACTCAACCT GAAGTTAGCC GAGACCATAC TGAACGAATG TTATCGGCAT TTGGCTATCC TGTGACTGTT GATGGCAATC GCATTAGTGT TGAAGGCGGC GGCACGCTAA AAGGCGGTGA TATCGCGGTG CCTGCTGATA TCTCTTCAGC GGCATTTTTT ATGGTCGCTG CTGCAATCAG TCAAGATAGT GAATTGACTT TAAAACAGGT CGGCATCAAT CCAACGCGTA CCGGTATTAT TGATATTCTA AAACTGATGC AAGCGGATAT CAGCCTGAGT AATGAGACTC ATGTTGGCGG CGAGCCAGTG GCAGATATTA CCATTCGTGG CTCAAACTTG GTTGGTATTG AGATACCAGA GTATTTGGTA CCGTTAGCCA TTGACGAATT CCCGGTATTA TTTATTGCTG CCAGCTGTGC CCAAGGTCGT ACTATTTTAA CCGGAGCAAA AGAGTTACGT GTCAAGGAAT CAGATCGCAT TGCGGTGATG GCGGAAGGCT TGCAGACATT AGGCGTTGAT TGTACCGTTA CTGAAGATGG TCTAATTATC GAAGGCAAAG GCACGCAAAG TCAAAATAGT GACATCAATA ATAGTCAGCC GGTGTTTGGA GGCGGAGATA TTGTCTCGCA TCATGACCAC CGTATCGCTA TGAGCTTTGC CGTTGCAAGT TTACGTGCCT CGCAGCAAAT TAGCATTGAA GGCATTGAAA CCATCAATAC CAGCTTCCCA GGATTTGCAG AGCTTGCCAA TCAAATTGGT ATGTCTATTG ACGTTGTGAG TGCTTAA
|
Protein sequence | MSSQQKTQQY KNLALLNAQS PLFNQVCVIG LGLIGASIAQ AIKNNGLAER IVAVDRHEPS LKEAIQHGLL DAGSVVLSEI VSGSDLIIIA VPAQAVQAVF IDIKNAMDSG LLATDCIITD VCSTKVNIID AAKAVFETLP VGLVPAHPIA GAENSGYHAR RATLFVNHSV IICELPTTSH LAIAKLSQLW EAVGASVMPM EAAHHDAILA HTSHLPHLLA FNLVEQLASH DDNLDMFRYA AGGFRDFTRI AASDPKMWHD IFFANQSAII SALDEYSVYL SDIRQLIIDK NSTALMGLLG RAQAARRHFG HMLASTPYTD TSAMSASYNI TPSNTVSGTI TIPGDKSISH RSIMLGSLAT GVTHVTGFLE GEDALATLQA FRDMGVIIEG PDNGNLTIHG VGMNGLKPSK TPLYMGNSGT SMRLLAGILA AQAFDSVLTG DTSLNKRPME RIAAPLRQMG AVIQSTGQKG TAPLSITGRD SVGTPLQGIE YDMPVASAQI KSCLLLAGLW AEGTTTVTQP EVSRDHTERM LSAFGYPVTV DGNRISVEGG GTLKGGDIAV PADISSAAFF MVAAAISQDS ELTLKQVGIN PTRTGIIDIL KLMQADISLS NETHVGGEPV ADITIRGSNL VGIEIPEYLV PLAIDEFPVL FIAASCAQGR TILTGAKELR VKESDRIAVM AEGLQTLGVD CTVTEDGLII EGKGTQSQNS DINNSQPVFG GGDIVSHHDH RIAMSFAVAS LRASQQISIE GIETINTSFP GFAELANQIG MSIDVVSA
|
| |