Gene Psyc_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1174 
Symbol 
ID3514072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1404421 
End bp1405266 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content41% 
IMG OID637669863 
ProductIclR family transcriptional regulator 
Protein accessionYP_264459 
Protein GI71065732 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0720169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.468935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA AAAACCTTGC AGATGAAGGC ACTAACAACA CAACACATAT CGAATTGTTA 
GAGCCGATTG CAGAGATGCG CGATAAGAAT GATCGGCAGT TTGTTACGGC TTTAGCTCGA
GGGCTAGAGT TACTTCGCTG CTTTACCCCG CAGCGTCCTT ATTTAGGTAA TCAAGACTTA
AGTCAACTGA CAGGTTTGTC TAAAGGAACC ATTACTCGTC TTACTTATAC CTTAGTCAAG
CTCGGCTATT TAAAACAATC GACCAACAGT AGTAAATATC AACTGTCTGC GGGTGTATTG
AGATTTGGCT ATACGATGAT GGCGAACGTC TCTATCAATA ACTTAGTAAC ACCGTACATG
GAAGAGTTAG CAGACTATGC CAATAGTGCC GTTGCCATGG CAACTCGCGA TCGACTAACG
ATGGTATATT TGAATGTTGT GCAAGGTGAT GGCACTACTA CCATGCGCCG TAATGTCGGC
TCATACCTGC CCATTCACTT AAGTTCAATG GGTAGAGCCT GTTTAGCCAG TATGCCGCAG
GCTGAGCAAG AATTCATTCT TAATGCAATT CGTAGTAAGT ATCAAGAGGA TTGGATAAAA
ATTAAAAGAG GGCTAGATAA AGCTTTTAAA GATTATGAAG ATTATGGGTA TTGTTTTTCA
ATTAGCGAAT GGCAAAAAGA TGTCAATGCA GTCGCCACTG CTTTCATGCA TCCTACTGAG
GGTTTACTGA CTTTCAATTG TGGCGCGCCA AATTTCGTTT TGAGCCGTAC AAAATTAGAG
GAAGATGTAG CCCCTCGTCT ATTGCATATG AAGAATAGTA TTGAAAGCAA TCTTTACATT
AGCTAG
 
Protein sequence
MTTKNLADEG TNNTTHIELL EPIAEMRDKN DRQFVTALAR GLELLRCFTP QRPYLGNQDL 
SQLTGLSKGT ITRLTYTLVK LGYLKQSTNS SKYQLSAGVL RFGYTMMANV SINNLVTPYM
EELADYANSA VAMATRDRLT MVYLNVVQGD GTTTMRRNVG SYLPIHLSSM GRACLASMPQ
AEQEFILNAI RSKYQEDWIK IKRGLDKAFK DYEDYGYCFS ISEWQKDVNA VATAFMHPTE
GLLTFNCGAP NFVLSRTKLE EDVAPRLLHM KNSIESNLYI S