Gene Psyc_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1169 
Symbol 
ID3514067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1397160 
End bp1398362 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID637669858 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_264454 
Protein GI71065727 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATG CCTATATTTA TGATGGATTA AGAAGTCCTT TTGGTCGGCA TGGAGGAGCA 
TTAGCAACGG TTCGTCCTGA TGACTTAATC GCCACAGTGA TGAAGACTTT GGTCGAAAAA
CACCAATTAC CCAATGATAT TTTTGATGAA GTACTAATCG GTAATACCAA TCAAGCTGGT
GAAGACTCAC GCAATATCGC CCGTAATGCC GCGTTGCTAG CAGGGTTAGA TGTCAAAACG
CCCGGTCAAA CCGTCAATCG CCTATGCGCT TCAGGATTAT CGACCATTAT TGATGCCGCT
CGTAGTATTA CTTGTAATGA GGGGGATATT ATTTTAGCGG GCGGCGTTGA GTCAATGACC
CGCGCCCCCT TTGTTTTTGC CAAGACCGAG CAGCCTTTTA GCCGTGAGTT TAAAGTATTT
GATACCACCA TTGGCAGCCG CTTCCCCAAT CCTATCATCG AAAAACAGTT TGGTAGCGAT
ACTATGCCGC AAACGGGTGA TAATGTTGCT CGCAAATACG GCATTACTCG CGAAGAAGCG
GATAAATTTG CAGCGGCCTC GCAAGCTAAG TACCAAGCGG CAAAACAAGC TGGGTTCTTT
GATGATGAAA TAACGCCAAT TATGGTATCG CAAGGTAGAA AATTACCAGA AAAAGCGATA
GCAGAAGATG AGCATCCCCG CGCTAGTTCT ACTGTTGAAG CATTACAAAA ACTGAAACCT
TTAAATAACG AAGGGGTCGT CACAGCAGGC AACGCATCAG GTATCAATGA CGGCGCAGCT
GCTCTTATTA TTGGATCAAA GCAAGCAGAA GAAAAGTTAG GCTTTAAGCC TATCGCAAAA
ATTCTCTCAT CCGGTGCTAT GGGTGTTGAG CCGAATATTA TGGGCATAGG CCCTGTTGAA
GCTATTAAAC TGGCATTGAA ACGTGCTGAT TTGACCCTTG ATGATATGTC CATCATTGAG
ATTAATGAAG CATTTGCCTC GCAAGTACTC GGTTGCCTCA AAGGTTTAGA TATTGACTTT
GATGATAAGC GCGTCAACCC TAATGGCGGT GCTATTGCCA TTGGACATCC GCTTGGTGCA
TCAGGCGCTA GAATAGCGCT AAGCACTGCG CGCGAGCTAC AGCGTACGGG TGAAAAATAT
GCAGTGGTCA GTTTATGCAT TGGCATTGGG CAAGGGCTTG CCATGGTGAT TGAACGAGTT
TAA
 
Protein sequence
MLDAYIYDGL RSPFGRHGGA LATVRPDDLI ATVMKTLVEK HQLPNDIFDE VLIGNTNQAG 
EDSRNIARNA ALLAGLDVKT PGQTVNRLCA SGLSTIIDAA RSITCNEGDI ILAGGVESMT
RAPFVFAKTE QPFSREFKVF DTTIGSRFPN PIIEKQFGSD TMPQTGDNVA RKYGITREEA
DKFAAASQAK YQAAKQAGFF DDEITPIMVS QGRKLPEKAI AEDEHPRASS TVEALQKLKP
LNNEGVVTAG NASGINDGAA ALIIGSKQAE EKLGFKPIAK ILSSGAMGVE PNIMGIGPVE
AIKLALKRAD LTLDDMSIIE INEAFASQVL GCLKGLDIDF DDKRVNPNGG AIAIGHPLGA
SGARIALSTA RELQRTGEKY AVVSLCIGIG QGLAMVIERV