Gene Psyc_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1162 
Symbol 
ID3514060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1389665 
End bp1390366 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content43% 
IMG OID637669851 
Productputative two component system regulatory protein 
Protein accessionYP_264447 
Protein GI71065720 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA AGCTTATGTA CAAAATTCTT CTCATTGAAG ACAATCCCGA TATCGTGGCA 
AATATCTATG CTTTTTTTGA ACCAAAAGGA TTTGAGCTGG ATAATGCCCA TAATGGTCTG
AGTGGCTTGG CACTGGCAGC AAACAATCGT TACGACGTGA TACTACTGGA TGTGATGCTT
CCCGGTATGG ACGGTACCAA ACTGTGTAAA ATGCTCAGAG AAGAGCTGCA TGATAAGACG
CCCGTATTAA TGCTAACCGC GCGTGACACT ATTTTGGATA AAGTCGCAGG GTTTGATAGT
GGTGCTGATG ACTATTTGGT CAAACCTTTC TCATTGGTTG AATTAGAAGC ACGTATAAAA
GCGCTGATAC GCCGTCATCA AGACGAACAT TTTCAGCACA ATATACAAGT AGGCTCATTG
TCTCTTAACG TAGCTGAACA CAGTGTCAAA CGAGACGACA AGCCATTAAA ATTAACCCCA
ACGGGATTCA AAATTCTGCA CACTCTAATG AGTGCCTCGC CACGAGTGGT TAGTAAAACT
GAGCTTGAGG AAAAGGTATG GGAACAGGAT GTGCCAAGCA GTGATGCCCT TCGCACACAT
TTGCATAGTG TGCGTGCACA AGTTGATAAG CCGTTCGATA AAACCATGAT AGTGACGATG
CCTGGCGTTG GTTACCAAAT TATTGATCCA GACAAGGTGT AA
 
Protein sequence
MDKKLMYKIL LIEDNPDIVA NIYAFFEPKG FELDNAHNGL SGLALAANNR YDVILLDVML 
PGMDGTKLCK MLREELHDKT PVLMLTARDT ILDKVAGFDS GADDYLVKPF SLVELEARIK
ALIRRHQDEH FQHNIQVGSL SLNVAEHSVK RDDKPLKLTP TGFKILHTLM SASPRVVSKT
ELEEKVWEQD VPSSDALRTH LHSVRAQVDK PFDKTMIVTM PGVGYQIIDP DKV