Gene Psyc_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1161 
Symbol 
ID3514059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1387860 
End bp1389590 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content41% 
IMG OID637669850 
Productphosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 
Protein accessionYP_264446 
Protein GI71065719 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTT ATCTCATTTT ATTAAGAAGT CCGTGTATGT CAAAACACTT AATTGCTGAT 
CCAGCCGTTG CAGAAACCAA TGATGCAAGC CGCGATAAAA GTAAATTTCA TCATCGTGAG
GTCAATCTTA CTTATCTAAT TATAGTCGTT GTACTATATC TCGTTGCTAC TGCAAATATC
GGCTTCTTTA AGCAAGTATT AATGATCTAT CCATTTGCTG ATAACATTGG TTTCATAGCT
TCTCTTAGCG GGCTATTGTT TGGGCTGATG TGGTTATTGT TTCAGCTATT ATGTTATCGA
TCAACAGCAA AAATAGTACT GATTGCTATG GTGCTGATTG CGGCAGCATG TAGTTACTTC
ACCGATACTT ATGGGACGAT ATTTGACCGT GGTATGTTGG TTAATAGCTT GCAGACTGAT
CAAGCAGAAG CGATGGGATT GATGGCACCA AGCTTTGTTA TTCGACTGCT GCTATTGGGT
GTGCTACCAG CTTTTGTGAT CAGCAAGATT CGTATAAAGC GCCTATCTAT AGGTCGCTCA
ATCGTGCAAA AGGCAATCAC CTTGATAACG TCTATTGCGA TAATAGCAGT TTGCCTATTG
CCATTCGGAG ATCAATACGC CAGCTTTTTT CGCCAGCATA AAATAGTGCG TAGTTATACC
AATCCCATTA CCCCTATTTA TTCTATCATC AAACTCGGTA CCGACTATGT CGATGAGCTA
CGTCGCCCTG ATACCTTGAT ACTGCATGCG ACAGATGCAA AACATATAGC AGCCGTCAAT
AGCACAACAA AACCTAAGCT GATGGTATTC GTAGTCGGTG AAACAGTTCG CGCTGATCAT
ATTGGTTTAA ATGGCTATAA ACGCGATACG CTGCCGCTAC TTGCCAGCCA GCCAGACATC
TATAGCTTCA AGCATGCTAC CTCTTGCGGC ACTTCAACCG CTTATTCAGT ACCGTGCATG
TTCAGTTATG CTAACAGAGA AGACTACGAC ATAGATACTG CTGAGTACAA TGAGAATGTG
CTGGATACGC TCAATAGACA AGGCGTCAAT GTCATCTGGC GAGACAACAA TTCTAGCTCT
AAAGGCGTGG CAGATCGAGT CACTTTTGAA GACTATAAAA CCTCTGAGTT AAACCCTAAT
TGTGATAGTG AGTGTCGTGA TATTGGCATG CTTGACGGCT TTGATACTTT AGTTAAGTCG
GACACAGGGG TCAAAGCAGC TGCTAAGCCA CAAGATACAC TAATTTTATT ACATCAAATG
GGCAATCATG GTCCTGCTTA TTACCAACGC TATCCTAAAG AGTTTGAAGA ATACAAGCCA
GTCTGTATGA CCAATGAGTT ATCCAAATGT GATGAACAGT CGGTAATTAA CGGTTATGAC
AATGCGATTC GCTATACTGA CTACTTTTTA AATGCCGTCA TAGATACGCT AAAACCCTAC
GAACAAGACT ATGATGTGGT GATGGTATAT ATTAGTGATC ATGGGGAAAG TTTGGGTGAA
AACAACGTGT ATTTACATGG TCTGCCGTAC GGTATTGCGC CGAATGCCCA AAAACAGGTG
CCAGTAATCA TTTGGTCTCC TAAAAACAAT GGTATTAATA CTAAAAGTCT GTCTGATATG
ACCAATCAGC CGGTGTCACA TGATTTTATT ACCCCAACCT TATTGAGTTT TTTTGGTATT
ACTACTCAAG AGGTTCAATC AGAACCTACC TTTTTTAAGA ATGGTAATTA A
 
Protein sequence
MKLYLILLRS PCMSKHLIAD PAVAETNDAS RDKSKFHHRE VNLTYLIIVV VLYLVATANI 
GFFKQVLMIY PFADNIGFIA SLSGLLFGLM WLLFQLLCYR STAKIVLIAM VLIAAACSYF
TDTYGTIFDR GMLVNSLQTD QAEAMGLMAP SFVIRLLLLG VLPAFVISKI RIKRLSIGRS
IVQKAITLIT SIAIIAVCLL PFGDQYASFF RQHKIVRSYT NPITPIYSII KLGTDYVDEL
RRPDTLILHA TDAKHIAAVN STTKPKLMVF VVGETVRADH IGLNGYKRDT LPLLASQPDI
YSFKHATSCG TSTAYSVPCM FSYANREDYD IDTAEYNENV LDTLNRQGVN VIWRDNNSSS
KGVADRVTFE DYKTSELNPN CDSECRDIGM LDGFDTLVKS DTGVKAAAKP QDTLILLHQM
GNHGPAYYQR YPKEFEEYKP VCMTNELSKC DEQSVINGYD NAIRYTDYFL NAVIDTLKPY
EQDYDVVMVY ISDHGESLGE NNVYLHGLPY GIAPNAQKQV PVIIWSPKNN GINTKSLSDM
TNQPVSHDFI TPTLLSFFGI TTQEVQSEPT FFKNGN