| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1147 |
|---|
| Symbol | madM |
|---|
| ID | 3514846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1372989 |
|---|
| End bp | 1373747 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637669836 |
|---|
| Product | malonate/sodium symporter, MadM subunit |
|---|
| Protein accession | YP_264432 |
|---|
| Protein GI | 71065705 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00808] malonate transporter, MadM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.141999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.564343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAA TTATAGCAAC CCTCACTAAA AATGCCTTTG TGACTGCTCT TGCAATAACA
GGCCTTGTGA TGTTTTTTTC TCACATACTA TCTAAGTATC TAACCAACAA CAAGCTACAG
TCATCTGCAA TTGCTATCAT ACTTGGTCTC GTTGCCGCCT ATTTTGCTGG TTTATATACT
GGTGGTGAAA AAGGTATTTC CGATATAGAG CTTTTCTCTG GATTTGCTCT GTTAGGGGGA
TCGATGCTTC GTGATCTTGC TATCTCATCA ACTGCTTTTG AAGTCGATGT AAAAGAGATA
AAACGTGCTG GGAAGATTGG TATTATCGCT TTGTTCATGG GCTGCATCAT ACCGTTTGTG
GCAGGAGCCG GTATTGCATG GATGTTAGGC TATAAAGATG CTGTTTCTAT GACCACCATT
GGCGCAGGTG CAATGACTTA TATCGTGGGA CCTATTACAG GGACAGCAAT TGGAGCAACC
TCTGATGTGA TTGCTTTATC CATTGCCATT GGTTTGATTA AATCCGTCTT CTTTATGATT
GCAACCCCTT TACTTGCGCG ATTTATGCAT CTAAAAAGCC CTCGTTCAGC CATGATTTTT
GGTGGCTTAG TAGGTACTAC CAGTGGTGTA GCCGCTGGCT TAGCAGCTAC TGATGTAAGA
CTGGTTCCAT ATGGAGCACT GGTTGCGACT TTTTATACGG GTCTGGGATG CTTATTAGGA
CCATCTATAT TTTTCTTAAC AGTAAACGCA ATATTTTAA
|
|---|
| Protein sequence | MDLIIATLTK NAFVTALAIT GLVMFFSHIL SKYLTNNKLQ SSAIAIILGL VAAYFAGLYT
GGEKGISDIE LFSGFALLGG SMLRDLAISS TAFEVDVKEI KRAGKIGIIA LFMGCIIPFV
AGAGIAWMLG YKDAVSMTTI GAGAMTYIVG PITGTAIGAT SDVIALSIAI GLIKSVFFMI
ATPLLARFMH LKSPRSAMIF GGLVGTTSGV AAGLAATDVR LVPYGALVAT FYTGLGCLLG
PSIFFLTVNA IF
|
|---|
| |