| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1146 |
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| Symbol | mdcA |
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| ID | 3514845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1371312 |
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| End bp | 1372967 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637669835 |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_264431 |
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| Protein GI | 71065704 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.604065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA ATATGAATGA AAAAGTATGG GATACGCAAA AAACCAGACG GCTTACCAAA
TTGAATGCTG CAAAAGACAA AGGGTTAAAT AAATTAGTCC CAAATGATAG AGCGATTGAA
TTACTTGAAA CCGTAATTAT CCGTGAGGAT AAAGTCTGCA TAGAAGGTAA TAATCAAAAA
CAAGCCGATT TTTTATCTGA ATGTCTCTCA CAGTGTAATC CAAAAGTATT GAATGATTTG
CATATTTTAC AATCGGTATT AGCGCTGCCA AGTCATATCG ATATATTTGA AAAAGGTATT
GCCAGTAAAG TGGATTTCTC ATTTTCTGGT CCTCAAGCAT TACGATTAGC CAATCTGGTT
CAACAACAAA AAATTCATAT TGGCTCAATT CATACTTATC TAGAGTTATA TGGTAGATAT
TTTATTGATT TAACGCCGAA TGTCTGCTTG ATCACCGCCC ATTCTGCAGA TGCTAACGGC
AATCTATATA CAGGACCAAA TACAGAAGAT ACGCCAGCTA TTGTAGAAGC GACGGCCTTT
AAAAGCGGTA TTGTCATCGC GCAAGTGAAT GAGTTAGTAG ATAACGTTCC CCGAGTTGAT
ATCCCTGCAG ATTGGGTGGA TTTTTTTATT GTTGCGCCTA AGCCCAATTA TATTGAGCCC
CTATTTACGC GCGATCCCGC CCAGATTACT GACGTACAAA TATTAATGGC TATGATGGTC
ATTAAAGGCA TTTATGCTCC CTATCAGATC AAGCGCCTGA ATCACGGTAT CGGTTTTAAC
ACTGCCGCAA TTGAGCTGTT ATTACCGACT TATGGAGAAG AATTAAACCT GAAAGGTAAA
ATATGTACGA ACTGGGCTCT TAATCCTCAT CCCACTATGA TTCCGGCTAT CGAAAGTGGG
TTTGTCGAAA GCATCCATAG CTTTGGTTCA GAAGTGGGTA TGGATGACTA TATTCAAGAG
CGCCCTGATA TATTTTTTAC GGGCAGTGAT GGCAATATGC GCTCCAATCG GGCCTTTAGT
CAAACAGCAG GATTATACGC TTGTGATTTA TTTATTGGCT CAACCTTACA AATTGACTTA
CAAGGTAACA GCTCAACAGC AACAGTAGAC CGTATTGCAG GGTTTGGTGG TGCACCAAAT
ATGGGTTCAG ATCCCCATGG ACGTCGACAT TCTAGTTATG GCTATTTGAA AGCAGGCCAA
GAAGCGACAG ATGGGCGAGT CATTAAAGGT CGTAAGTTAG TAGTACAGTT GGTAGAAACC
TTTCGCGAAA ATATGAACTC AGTCTTTGTT GAAGAGCTTG ATGCGTGGCA GTTACAAGAA
AAAATGGGCA GTGACTTTCC GCCTATTATG ATATATGGCG ACGATGTGAC ACACATTGTC
ACCGAAGAGG GTATCGCCAA TTTATTATTG TGCCGCACTC CAGAAGAAAG GGAGCAAGCT
ATTCGTGGTG TGGCAGGCTA TACCTCTATT GGTATGCAGC GAGATCATGA GAAGGTTGAA
GAGCTCAGAG CGCGCAAGAT TATCCAGCGG CCAGAAGATC TTGGCATTGA TATCTCAAAA
GCCAATAGAG ACTTATTGGC GGCAAAGTCT GTTAAAGACT TAGTTAAATG GTCAAATGGC
ACTTATGCTC CCCCAAGTCG CTTCAGAAAC TGGTAA
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| Protein sequence | MKANMNEKVW DTQKTRRLTK LNAAKDKGLN KLVPNDRAIE LLETVIIRED KVCIEGNNQK
QADFLSECLS QCNPKVLNDL HILQSVLALP SHIDIFEKGI ASKVDFSFSG PQALRLANLV
QQQKIHIGSI HTYLELYGRY FIDLTPNVCL ITAHSADANG NLYTGPNTED TPAIVEATAF
KSGIVIAQVN ELVDNVPRVD IPADWVDFFI VAPKPNYIEP LFTRDPAQIT DVQILMAMMV
IKGIYAPYQI KRLNHGIGFN TAAIELLLPT YGEELNLKGK ICTNWALNPH PTMIPAIESG
FVESIHSFGS EVGMDDYIQE RPDIFFTGSD GNMRSNRAFS QTAGLYACDL FIGSTLQIDL
QGNSSTATVD RIAGFGGAPN MGSDPHGRRH SSYGYLKAGQ EATDGRVIKG RKLVVQLVET
FRENMNSVFV EELDAWQLQE KMGSDFPPIM IYGDDVTHIV TEEGIANLLL CRTPEEREQA
IRGVAGYTSI GMQRDHEKVE ELRARKIIQR PEDLGIDISK ANRDLLAAKS VKDLVKWSNG
TYAPPSRFRN W
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