| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1141 |
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| Symbol | mdc |
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| ID | 3514840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1367632 |
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| End bp | 1368519 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637669830 |
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| Product | ATP:dephospho-CoA triphosphoribosyl transferase |
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| Protein accession | YP_264426 |
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| Protein GI | 71065699 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
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| TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0392227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.36421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGTGA ATATTTTATC AGAGCCCACC AACGAAACCT TATCCTCTAA ACAAGCAATC
TGGCAGCAAA TCGATGATTT TGCGCTTGAT GCTTTATATG ATGAGTTGAA CCTTGAAAAC
AAACCGGGAT TGGTTTGTCC ATCAAGCAAC GGCAGCCATT CGGATATGAA TCATGATACT
TTTATAGCGA GTATCACATC TTTAAGAGGG TATTTTGCCA CGCTAAGCGA ATTCGGCTAT
GAAAATAGAG CGTTCGTTGA TCTAAAAAAC AAAGGTATTT ACCAAGAAAT AAAAATGCGC
CAAGCCACCA ATAATGTTAA TACCCATAAA GGAGCTATAT TTAATTTAGG GTTTGCAAGT
GCCGCAATCG GTAAATGCTT ACAACAGAAT CAGTCATTAA CCACCCAAAA TATTTGTGCC
CAAATTGTCA ATAGCTGGCA GTATGACTTA ACGCATCACC TAGAACGCAA AGCAGACAGT
CATGGGCAGC AAATGTATAA AAAGTATGGG GTAACGGGTG CAATTGAGAT GGTTTCTAAT
GGTTTTCAAA TCATTCAGAA CACAGCCTTG CCTTGTTTTT ACGATACTTT TTATCGTACC
CAAGATTTCG AAAAAGCAGC CATGCAAACT TTAATGATTT TAATATCTGC ATTATCGGAC
ACCAATCTTG TTTGGCGTGG CGGTATAAAA GATTTAATGA ATGCTCAAAT GATGGCAAAA
CAGTTTTTAC AGGCGGGGGG CGTTTATCAA TCAAATTGGC GTCAGGCTGT AAGTACGGTT
AATCAATATT TCATTCACTG TAATCTCAGC CCTGGTGGTA GTGCGGACTT GCTGGCGGTT
ACGATTTTCT TTTATAAGGT TGAAAATGAA TTTAATAATC CTGTTTAG
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| Protein sequence | MSVNILSEPT NETLSSKQAI WQQIDDFALD ALYDELNLEN KPGLVCPSSN GSHSDMNHDT
FIASITSLRG YFATLSEFGY ENRAFVDLKN KGIYQEIKMR QATNNVNTHK GAIFNLGFAS
AAIGKCLQQN QSLTTQNICA QIVNSWQYDL THHLERKADS HGQQMYKKYG VTGAIEMVSN
GFQIIQNTAL PCFYDTFYRT QDFEKAAMQT LMILISALSD TNLVWRGGIK DLMNAQMMAK
QFLQAGGVYQ SNWRQAVSTV NQYFIHCNLS PGGSADLLAV TIFFYKVENE FNNPV
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