| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1132 |
|---|
| Symbol | |
|---|
| ID | 3514831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1354889 |
|---|
| End bp | 1355800 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637669821 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_264417 |
|---|
| Protein GI | 71065690 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0177356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAA TCGATGCGAT GCGTGCCTTT GTAGCAGTGG TGACCGAAGG AAGCTTTAGC
AATGCGGCAA ATACCTTACA GCTATCACCT CAGTTGGTGA GCAAGTATGT CTCTAAGTTG
GAGGAGCAGC TAAATATACG CCTGCTTAAT CGCACCACTC GTAAAGTCAG CCTTACCGAA
GCTGGTAGTC ATTACTTTGG ACATGCACAG CAGATTTTAC TTAATATTGA TGACATGGAA
TCACAATTAG GTGGCTTACA GCAGAATCCC AAAGGCGTCT TAAGAATCAG TGCACCAGTA
TCCTTTGCTT TAAAACATAT GGCCAAGTTA ATCACTGACT TTCAGATGCG TTATCCATTG
GTCACTGTCG ATCTACAATT GACTGATCGT AAAGTCGATA TTGTCGAAGA GGGTTTCGAT
GTAGCCTTGC GCATTGGACA ATTGAAAAAC TCATCACTAA TTGCTAAGAA GGTCGCACCC
ATTCGCGTGG TTTTATGCGC CGCGCCTGAG TACCTTAATA AGCATGGCAC GCCTACTCAA
CCTAAAGACT TAGAGCATCA TCGATATTTG CATTACAGCT ATATGAATAT GGATAGTAAG
GATAATATTC ACCAATTATT AAAAGCAAAA TACCTCAAGC AAGGTAGCGA GTTTCGTAGT
AATAATGGTG ATGTATTGGT GGAAGCGGCT ATTGCAGGCG CAGGACTGGT ATTACAGCCG
ACTTTTATTA TCAGTGAAGC AATTAGCAGT GGCAAACTAG TAGTAGTGTT GCCAGAAATT
GAACCTGAGG CTTTGGGCTT ATATGCAGTC TATGCCCATA GAAAACTGCT GCCACACAAG
GTGAGGTGCT TTATTGATTT TATGGAGGGA TATTATGGCA CGCCACCGTA TTGGGACGAG
TCTATACCTT AG
|
|---|
| Protein sequence | MDRIDAMRAF VAVVTEGSFS NAANTLQLSP QLVSKYVSKL EEQLNIRLLN RTTRKVSLTE
AGSHYFGHAQ QILLNIDDME SQLGGLQQNP KGVLRISAPV SFALKHMAKL ITDFQMRYPL
VTVDLQLTDR KVDIVEEGFD VALRIGQLKN SSLIAKKVAP IRVVLCAAPE YLNKHGTPTQ
PKDLEHHRYL HYSYMNMDSK DNIHQLLKAK YLKQGSEFRS NNGDVLVEAA IAGAGLVLQP
TFIISEAISS GKLVVVLPEI EPEALGLYAV YAHRKLLPHK VRCFIDFMEG YYGTPPYWDE
SIP
|
|---|
| |