Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1123 |
Symbol | cstA |
ID | 3514821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1337222 |
End bp | 1338901 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637669811 |
Product | carbon starvation protein A |
Protein accession | YP_264408 |
Protein GI | 71065681 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.15869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.492518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTG CAATTGTGCT ATTGTTTGCT GTTGCCGCTA TGCTTGGCGG TTATGTGTTT TACTCAAAAT TTATCGCCAC TAAAATTTTA GCATTAGATA ATAGCATCCC CACGCCAGCA CATACCATGA AAGATGGGGT AGATTATATC CCAACCAATA AATATGTGTT ATGGGGACAC CATTTTACTT CAGTCGCAGG GGCAGCTCCG ATTATTGGTC CTGCCATTGC AGTTATTTGG GGCTGGGTAC CTGCCATCAT CTGGGTGGTA TTGGGCACCA TTTTTATGGC GGGTGTCCAC GACATGTCAG CCATTTGGGC AAGTATGCGC AATCGAGGTC AGTCGATTGG CTCGATTGCC GGTACCGTCA TGGGTACACG TGTACGTAGC TTAATGATGA TCGTCATCTT TTTATTATTA CTGATGGTGA ATGCAGTATT CGGCGTCGCT ATTGCGAATA TGATGATAAA AACCCCCTCC GCTGTGTTGC CCGTTTGGGG TGCTTTGATA GTGGCCTTTA TCATTGGTCA GTGTATTTAT CGCTATAAGA TGAGTCTGGT TTGGGTATCA ATCATTGGGG TCACCGCTTT ATATGGGCTT ATCTATCTTG GTCCTATGTT CCCTATCGTG TTACCTGAGA CATTCTTAGG CTTACCTGAT AATGCCGTTT GGATTATTAT TTTATTTGCC TATGCGGCAA TCGCTTCTTT GTTACCTGTT TGGATGCTCT TGCAACCGCG AGATTACATC AATGGCTTGC AGTTATTTGT CGGTCTGATT TTATTGTACG CCGCCATCTT TATTGCTACG CCGAATATTG TCGCGCCAGC AATAAACACG GCATTGCCAA TCGGCACACC ATCTATGTTA CCTTTATTGT TTGTGACCAT TGCTTGTGGT GCAATCTCAG GCTTTCATGG TTTGGTAGCG ACAGGTACGA CGTCTAAGCA GATTGATAAA GAAGAAGATG TGCGATTCGT TGGTTATTTC GGTGCCATGG GTGAGGGTAT GCTGGCACTT GGTGCGATAC TTGCGGCAAC CGCAGGCTTT GCAACCCTTG GCGACTGGCA AGCAGTTTAT CAAAAATTTG GTGACGGCTC TATTGGTGCC TTTATTGATG GCGGCGCGAC CATCTTGAAT GCTGGCGTTG GCATTGATAT GGTTTTATCA CAGACGATGC TTACGGTAAT GGCAGCATTG TTCGCTGGTA CCACGATGGA TACTGGGGTA CGTCTGCAAC GTTATATCTT CCAAGAGTTT GGTGAGATTT ATAAACTGCC CGTACTGAAT AAAAGTGTGG TAGCAACGTT GCTTGCCGTT GGCAGCTGTC TGTTATTAGC ATTTGGTGCC GGTGGCATCG ATGGTGCTGG TGGCATGATT ATCTGGCCGC TATTTGGCAC GACAAATCAG CTAATGGCAG CATTAACCTT GATGATTGTC ACAGTCATCT TGTTACGTAA GGGCAGACCA GTATGGTATA CTTTAGGACC CTTATCTTTC TTACTAGTCA TGACTGTTTT TGCGTTATTA ATTCAGCTAA AAACTTTTTT CAATGACGGT AATTGGCTAC TTGTCATTAT GGATATCATT ATTTTGGTCG CCACGATTTT AGTGACGTTT GAGAGTCTAT CAGTACTACG CAAAGAATGG TCGATACACA AGGGCAAAAG TAACCTCTAA
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Protein sequence | MNSAIVLLFA VAAMLGGYVF YSKFIATKIL ALDNSIPTPA HTMKDGVDYI PTNKYVLWGH HFTSVAGAAP IIGPAIAVIW GWVPAIIWVV LGTIFMAGVH DMSAIWASMR NRGQSIGSIA GTVMGTRVRS LMMIVIFLLL LMVNAVFGVA IANMMIKTPS AVLPVWGALI VAFIIGQCIY RYKMSLVWVS IIGVTALYGL IYLGPMFPIV LPETFLGLPD NAVWIIILFA YAAIASLLPV WMLLQPRDYI NGLQLFVGLI LLYAAIFIAT PNIVAPAINT ALPIGTPSML PLLFVTIACG AISGFHGLVA TGTTSKQIDK EEDVRFVGYF GAMGEGMLAL GAILAATAGF ATLGDWQAVY QKFGDGSIGA FIDGGATILN AGVGIDMVLS QTMLTVMAAL FAGTTMDTGV RLQRYIFQEF GEIYKLPVLN KSVVATLLAV GSCLLLAFGA GGIDGAGGMI IWPLFGTTNQ LMAALTLMIV TVILLRKGRP VWYTLGPLSF LLVMTVFALL IQLKTFFNDG NWLLVIMDII ILVATILVTF ESLSVLRKEW SIHKGKSNL
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