Gene Psyc_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1123 
SymbolcstA 
ID3514821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1337222 
End bp1338901 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content44% 
IMG OID637669811 
Productcarbon starvation protein A 
Protein accessionYP_264408 
Protein GI71065681 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.15869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.492518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTG CAATTGTGCT ATTGTTTGCT GTTGCCGCTA TGCTTGGCGG TTATGTGTTT 
TACTCAAAAT TTATCGCCAC TAAAATTTTA GCATTAGATA ATAGCATCCC CACGCCAGCA
CATACCATGA AAGATGGGGT AGATTATATC CCAACCAATA AATATGTGTT ATGGGGACAC
CATTTTACTT CAGTCGCAGG GGCAGCTCCG ATTATTGGTC CTGCCATTGC AGTTATTTGG
GGCTGGGTAC CTGCCATCAT CTGGGTGGTA TTGGGCACCA TTTTTATGGC GGGTGTCCAC
GACATGTCAG CCATTTGGGC AAGTATGCGC AATCGAGGTC AGTCGATTGG CTCGATTGCC
GGTACCGTCA TGGGTACACG TGTACGTAGC TTAATGATGA TCGTCATCTT TTTATTATTA
CTGATGGTGA ATGCAGTATT CGGCGTCGCT ATTGCGAATA TGATGATAAA AACCCCCTCC
GCTGTGTTGC CCGTTTGGGG TGCTTTGATA GTGGCCTTTA TCATTGGTCA GTGTATTTAT
CGCTATAAGA TGAGTCTGGT TTGGGTATCA ATCATTGGGG TCACCGCTTT ATATGGGCTT
ATCTATCTTG GTCCTATGTT CCCTATCGTG TTACCTGAGA CATTCTTAGG CTTACCTGAT
AATGCCGTTT GGATTATTAT TTTATTTGCC TATGCGGCAA TCGCTTCTTT GTTACCTGTT
TGGATGCTCT TGCAACCGCG AGATTACATC AATGGCTTGC AGTTATTTGT CGGTCTGATT
TTATTGTACG CCGCCATCTT TATTGCTACG CCGAATATTG TCGCGCCAGC AATAAACACG
GCATTGCCAA TCGGCACACC ATCTATGTTA CCTTTATTGT TTGTGACCAT TGCTTGTGGT
GCAATCTCAG GCTTTCATGG TTTGGTAGCG ACAGGTACGA CGTCTAAGCA GATTGATAAA
GAAGAAGATG TGCGATTCGT TGGTTATTTC GGTGCCATGG GTGAGGGTAT GCTGGCACTT
GGTGCGATAC TTGCGGCAAC CGCAGGCTTT GCAACCCTTG GCGACTGGCA AGCAGTTTAT
CAAAAATTTG GTGACGGCTC TATTGGTGCC TTTATTGATG GCGGCGCGAC CATCTTGAAT
GCTGGCGTTG GCATTGATAT GGTTTTATCA CAGACGATGC TTACGGTAAT GGCAGCATTG
TTCGCTGGTA CCACGATGGA TACTGGGGTA CGTCTGCAAC GTTATATCTT CCAAGAGTTT
GGTGAGATTT ATAAACTGCC CGTACTGAAT AAAAGTGTGG TAGCAACGTT GCTTGCCGTT
GGCAGCTGTC TGTTATTAGC ATTTGGTGCC GGTGGCATCG ATGGTGCTGG TGGCATGATT
ATCTGGCCGC TATTTGGCAC GACAAATCAG CTAATGGCAG CATTAACCTT GATGATTGTC
ACAGTCATCT TGTTACGTAA GGGCAGACCA GTATGGTATA CTTTAGGACC CTTATCTTTC
TTACTAGTCA TGACTGTTTT TGCGTTATTA ATTCAGCTAA AAACTTTTTT CAATGACGGT
AATTGGCTAC TTGTCATTAT GGATATCATT ATTTTGGTCG CCACGATTTT AGTGACGTTT
GAGAGTCTAT CAGTACTACG CAAAGAATGG TCGATACACA AGGGCAAAAG TAACCTCTAA
 
Protein sequence
MNSAIVLLFA VAAMLGGYVF YSKFIATKIL ALDNSIPTPA HTMKDGVDYI PTNKYVLWGH 
HFTSVAGAAP IIGPAIAVIW GWVPAIIWVV LGTIFMAGVH DMSAIWASMR NRGQSIGSIA
GTVMGTRVRS LMMIVIFLLL LMVNAVFGVA IANMMIKTPS AVLPVWGALI VAFIIGQCIY
RYKMSLVWVS IIGVTALYGL IYLGPMFPIV LPETFLGLPD NAVWIIILFA YAAIASLLPV
WMLLQPRDYI NGLQLFVGLI LLYAAIFIAT PNIVAPAINT ALPIGTPSML PLLFVTIACG
AISGFHGLVA TGTTSKQIDK EEDVRFVGYF GAMGEGMLAL GAILAATAGF ATLGDWQAVY
QKFGDGSIGA FIDGGATILN AGVGIDMVLS QTMLTVMAAL FAGTTMDTGV RLQRYIFQEF
GEIYKLPVLN KSVVATLLAV GSCLLLAFGA GGIDGAGGMI IWPLFGTTNQ LMAALTLMIV
TVILLRKGRP VWYTLGPLSF LLVMTVFALL IQLKTFFNDG NWLLVIMDII ILVATILVTF
ESLSVLRKEW SIHKGKSNL