Gene Psyc_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1109 
Symbol 
ID3514807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1320129 
End bp1321415 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content46% 
IMG OID637669797 
Productmetal Ion (Mn2+/Fe2+) transporter, NRAMP family 
Protein accessionYP_264394 
Protein GI71065667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.293858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC AACGACTCAA TAACCCAAGC GCCACAGGCG ATACTCTCCC CGTGCAGCAA 
GAAGGATTTA GCTGGCGCAT CTTTGGTCCC GGTATTCTGA TGGCGACCGC TGCTATTGGC
GGCTCGCATC TGATTTCATC GACACAGGCT GGCGCGTTAT ATGGCTGGCA GCTGGCGATT
ATGATTATTC TAGCCAACGT CTTCAAATAC CCGTTCTTCC GCTTTGCCAC CGATTATGTC
TACGACACCG GTGAGAGCTT AATCGCAGGC TATGCCAAAC GCTCAAAAGC CTATCTCTGG
ATTTATTTTA TTCTATCCAT TTTATCGGCG GTAATTAGTA CGGGTGCAGT GACATTGCTT
GCTGCAGTGA TATTGGGCTT TATGCTGCCC GCATCTGTAG GACTATCAAG TATTAGCTTA
GCTGTCATCA TCGTTGCTAT ATGTTGGTTT TTTCTGATTG CTGGTCATTA TAAGTTGCTT
GACGGTGTGA CTAAGTGGAT TATGATTGCT CTCGTATCCG CAACCGTGTT AGCGGTGATG
ATTGCTGCTG GTAAGCCGAC TGTTATGGTT GCTGATTTTG TCCCTGCCTC TCCTTGGAAC
TTGGCGACTT TAGGATTTAT TGTTGCACTC ATGGGTTGGA TGCCAGCACC ACTTGAGTTC
GCTGCCATTA CGTCGATGTG GACATCGGCA AAGAGAAAAG CTGACAATAC CACTCACCGT
CAGGGGTTAC TGGATTTTAA TGTAGGTTTC TTAGTTTCTG CTATTTTAGC CTTGTTCTTT
TTAGCGTTGG GCGTTTTCGT ACAATACGGC TCAGGTCAAG AGATTCAAAC CGCAGGTGTC
GCTTATATTG ATCAGCTTAT CAATATGTAT ACTGCCACTA TCGGTGAATG GTCAAGACTA
CTGGTCGCCT TCGTCGCCTT TATGTGTATG TTTGGCACGA CCATTACCTG TGCGGACGGT
TATGGTCGCG CTAATGCCGA ATGCTGGCGC TTACTAAAAG GTGAAGACGA GATTAACAAA
AAGCAAATCG CCTTTTGGAC CACTTATGCT ATCGGTGGCG GTCTTTTGAT TATTACTTTC
TTTGCAGGAC AATTAGGCGC TATGCTGAAG TTTGCGATGA TATCGGCATT TATATCCGCA
CCTATCTTTG GTTGGTTAAA CTACTCGCTA GTGAAAAACC ATAAAAAGCT ATCAGCCGGC
ATGAACGCCT ATTCAATTGC AGGGCTTATA TTCTTAGGTG GCTTTACCTT GTTATTTTTA
GCCAGCCTTG CAGGTATCAT TGGTTAA
 
Protein sequence
MTTQRLNNPS ATGDTLPVQQ EGFSWRIFGP GILMATAAIG GSHLISSTQA GALYGWQLAI 
MIILANVFKY PFFRFATDYV YDTGESLIAG YAKRSKAYLW IYFILSILSA VISTGAVTLL
AAVILGFMLP ASVGLSSISL AVIIVAICWF FLIAGHYKLL DGVTKWIMIA LVSATVLAVM
IAAGKPTVMV ADFVPASPWN LATLGFIVAL MGWMPAPLEF AAITSMWTSA KRKADNTTHR
QGLLDFNVGF LVSAILALFF LALGVFVQYG SGQEIQTAGV AYIDQLINMY TATIGEWSRL
LVAFVAFMCM FGTTITCADG YGRANAECWR LLKGEDEINK KQIAFWTTYA IGGGLLIITF
FAGQLGAMLK FAMISAFISA PIFGWLNYSL VKNHKKLSAG MNAYSIAGLI FLGGFTLLFL
ASLAGIIG