Gene Psyc_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1083 
Symbol 
ID3514969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1294131 
End bp1295375 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content46% 
IMG OID637669772 
Producthypothetical protein 
Protein accessionYP_264369 
Protein GI71065642 
COG category[S] Function unknown 
COG ID[COG5505] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.456212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA TTTCTAATTT AGCTATTGAA AGCTTGCCAT TAGCGTTTGG CATCATTATG 
GCGATTATCG GATTGGTTTT TTATACCCAA GCATTGCCTG GTAAGTTTTG GCAACGGTTT
TATGCGGTGC TACCGGGTAT CGTACTGTGC TGTTTTATAC CTGCGACGCT AAACAGCTTA
GGTGTCTTCG CTGACGGTAT TGGCTCGCAG ATTTATGGTT TTACTGCTAC TTATCTGTTG
CCAGCCAGTT TACTGCTAAT GACCTTATCA ATGGATGTAC CGAAGATACT GGGCTTAGGC
TGGAAAGCGA TAGCTATGTT CTTCGCGGCC AGTATCGCCA TTGTCATTAG TGGTCCTATT
AGCTTAGGTA TCGCTAAATG GGTGTCGCCT GAGATGTTTA CCGATGACAC GCTATGGCGC
GGCTTTTCAG CGGTTGCTGG TAGCTGGATT GGCGGCGCGG CCAACCAAGC AGCGATGAAG
GAGCTGTTCG GGGTCAGTGA TGATCTGTTT GGGATGATGA TATTGGTCGA TACCACCAAT
GCTTCACTGT GGTTACTGGC CATCTTAGTC ATGGCAAAAC ACAGTGAAAA GATTGACAAG
TTTTTACGGG CGGATAGCAG TAGCATTGAT AAGGTCGTCA AAGCCGTTGA AAGTTATGAG
CGTGACAATG CTCGTCCTGC CACGCTTAAT GATTTGATGG TGATGTTTGG TTTGTGCTTT
GCCATGGTTG GTGTAGCACA TTTCGTTGGT GGTCAGATTG CAGGGTTCTT TGCCCCTTAT
AGTTGGGCGG TACAATACAG CTTTGCCAGC TCATTCTTTT GGATGGTGGT GATTATCACC
TTAATAGGGG TAGTTTTCTC CTTTACCAAA ATACGTCGCC TTGATCATGT TGGTGCTTCA
AAAATTGGTA CCGTCTTTAT CTTCATATTA ATTGCTGCTA TTGGTATGCA AATTAATCTA
GCAGGTATCG TCTCACAATG GCGACTGCTA CTAATTGGTT TGCTTTGGAT GAGCATCCAT
GTGATATTGA TATTTATTTT TGCCAGAATC ATCCGTGCGC CGTTTTTCTT TTTGGCAGTC
GGCTCCAATG CCAATACTGG CGGCGCGTCA TCGGCACCCA TTGTCGCAAC GGCATTTCAC
CCGTCACTAG CGCCAGTTGG GGTGTTTTTG GGTATTTTAG GCTATGCCGT GGGTACCTTT
GGTGGTTACA TCAGTACGCA GATGATGCGG CTGGTGGTGG GGTGA
 
Protein sequence
MPDISNLAIE SLPLAFGIIM AIIGLVFYTQ ALPGKFWQRF YAVLPGIVLC CFIPATLNSL 
GVFADGIGSQ IYGFTATYLL PASLLLMTLS MDVPKILGLG WKAIAMFFAA SIAIVISGPI
SLGIAKWVSP EMFTDDTLWR GFSAVAGSWI GGAANQAAMK ELFGVSDDLF GMMILVDTTN
ASLWLLAILV MAKHSEKIDK FLRADSSSID KVVKAVESYE RDNARPATLN DLMVMFGLCF
AMVGVAHFVG GQIAGFFAPY SWAVQYSFAS SFFWMVVIIT LIGVVFSFTK IRRLDHVGAS
KIGTVFIFIL IAAIGMQINL AGIVSQWRLL LIGLLWMSIH VILIFIFARI IRAPFFFLAV
GSNANTGGAS SAPIVATAFH PSLAPVGVFL GILGYAVGTF GGYISTQMMR LVVG