Gene Psyc_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1070 
Symbol 
ID3514956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1279739 
End bp1280923 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content46% 
IMG OID637669759 
ProductABC sulfate/thiosulfate transporter, periplasmic solute-binding protein 
Protein accessionYP_264356 
Protein GI71065629 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAT CGAGAGCGTC TATGCAAACG ACCAATATAG CCAAGAATCA GCCTTTACGT 
CATATCTCAA TGACTGACAA TCAAGTGATT CAAAATAAAG TCATTCAAAA TAAAGTACCA
CGTACCTTGA TAATGGGTGG CGCGCTGACG ATGGCAGTAT TCATGACAGG CTGTAGCCCT
ACTGAAGCCA CGAAAAATGA GACACAGACC AGCGCACAAA AATCAGCAGC ACCGTCGCAA
GATATTAATC TGCTTAACGT TTCTTACGAT GTCTCACGCG ATTTTTATAA GGACTACAAT
ACCTTATTTG CTAAAGGCTA CCAAAAAGAG CATCCCAATA GCAAAGTACA CGTCAATCAG
TCGCATGGTG GCTCGAGTAA GCAAGCACTG TCGGTTGCCA ATGGTCTACA AGCGGATGTG
GTGACCTTTA ACCAAGAAAG CGATATGAAT CTATTGGTCG AAAAAGGCTT GGTTGCTGCT
GACTGGCAGA AAGCGTTACC AAACGGCGCT GTCCCTTATA CCAGCACCAT AGTGCTATTG
GTACGTAGCG GAAATCCAAA GGGTATTAAA GACTGGCAAG ATTTGGCCCG TAGTGACGTG
GCTATAGTGA TACCAAATCC AAAAACCAGT GGCACAGCGC GTTATGCCTT TTTGGGTGCC
TATGGTTATG GTCTGCATCA TTTTAAAGAA AATGTTGAAA CCTCTATCAA AACAGATACC
TTTATCAAGA AGCTGCTAGC AAACGTCGTC ACTTATGACA ATGGCGCGCG TGCAGCAACG
ACCAGCTTTA CCCAGCGCGG TTTAGGGGAT GTACTCATTA CGACCGAAAA CGAAGCGCAT
TTGGCTGCCA AGCAATTTGC CAAAGGACAG GTAGATATTG TCTATCCACG TTATTCAGTG
TTGATTGCCA ATCCTGTCGC GGTAGTCACT GCGGTAACTG ATAAGGCGGG CAAAACAGAA
GCGGCAAACA CCTATCTAAA AAGCTTATGG GACACGCCAG CACAGGAGCT GATGGCACAG
AGGTACATGC GTCCTAGTAA TGAGCAAGTG CTTGCTGCCC ATAAAGATAC CTTGCTTGAT
ATTGAGAGGT TTGAGCCGGT GAGTGTCTTT GGTCCTTGGA CACAGATTAT GGAGACGTTT
TTTGTTGATG GCGGGCGTTT TGATAAGCTG GCAAGTGTGC AGTAA
 
Protein sequence
MTLSRASMQT TNIAKNQPLR HISMTDNQVI QNKVIQNKVP RTLIMGGALT MAVFMTGCSP 
TEATKNETQT SAQKSAAPSQ DINLLNVSYD VSRDFYKDYN TLFAKGYQKE HPNSKVHVNQ
SHGGSSKQAL SVANGLQADV VTFNQESDMN LLVEKGLVAA DWQKALPNGA VPYTSTIVLL
VRSGNPKGIK DWQDLARSDV AIVIPNPKTS GTARYAFLGA YGYGLHHFKE NVETSIKTDT
FIKKLLANVV TYDNGARAAT TSFTQRGLGD VLITTENEAH LAAKQFAKGQ VDIVYPRYSV
LIANPVAVVT AVTDKAGKTE AANTYLKSLW DTPAQELMAQ RYMRPSNEQV LAAHKDTLLD
IERFEPVSVF GPWTQIMETF FVDGGRFDKL ASVQ