Gene Psyc_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1063 
SymbolsbcC 
ID3514949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1267100 
End bp1271023 
Gene Length3924 bp 
Protein Length1307 aa 
Translation table11 
GC content44% 
IMG OID637669752 
Productexonuclease SbcCD, C subunit 
Protein accessionYP_264349 
Protein GI71065622 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00618] exonuclease SbcC 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTAA TTGAATTAAG ACTAAAAAAC CTCAACTCCT TAAAAGGCGA ATGGCACATT 
GATTTTAGTG ACGCCGCTTT TCTTAACGAA GGTATCTTTG CCATTACGGG GCAAACAGGC
GCTGGCAAGA CCACCATTTT GGACGCTATT TGTTTGGCGC TCTACAGCCA AACGCCACGA
CTCGGTGATA TTACTGGCTC TACCAATGAG ATCATGACCC AAGGTACAGG AGAGTGCTCG
GCAGAAGTTA TTATCGAGAT TGACGCCAAG CGATATCAGT GTTCATGGTA CCAACATCGT
GCCCACAAAA AAGCCAAAGG CAACTTATTA CCGATTAAGC ACGAGATTAG CGAGGTCAAG
TCTGGCAAGA TTTTAGAAGA AAAAAAATCC AAAACCTCTG CTTATATCCA AGCGCTTATT
GGCATGGATT TTAGCCAATT TACCCGCTCC ATCATGCTGG CGCAAGGCAG TTTTGCTGCG
TTTTTAAAAT CTGATATCGG TGATAGAGCG GCGATTTTAG AGAAAATAAC GGGTACTGCT
ATCTATGCCA AAATCTCACT CAATGTTCAT GAGAAAAAAC GCTTTGAAGA AGATGTGCTC
AGTAAATTGC AGGCAGGCGT TGATGGCTTA TCCTTGCTAA GTATTGAAGA CGAAAATCTG
CAGGCAGCCG AGCTAAAAGC ATTAAATCAA CAGCAAAGCA CACAGCGACA AAGCTTTAAG
ACATTAAGTG AGCAGCTGCA ATGGCTAAAT AACGTACAAC AGCTGCAAAA TAACCTATCT
ATTTATCAAA GCGAGTTTGC AACCGCCCAG CAAGCGCAGC AAGCCTTTGT TCCAGAAGCC
AAGCGTTTAA GCATTGCCAA CAAGGCATTA GAGATTGATA GCCAGTTTCG CGAGCTTAGC
TATAGTCGTG AGACGGTAAA GAAGCTAGAT GTTGAACAAC AGAGTTTGCT GAGCCAAATC
CCTGCCCAGC AACAAGCGCT GGCACAAGCT GCATGCCATT TAGACGATGC CAACACGCTA
GGAAAACAAG CCGCAGACAA CCTTCAAACA AACTTGCCTG TCATCGCACA GGTGCGCGAA
TTAGATCATA ATATCAGACA GCAGTCTCAG TCCTTAGTGG AATACAACCA GCGTAAGGAC
TTATTGGTAG GTAATGCACA GATATTATGC CAAGAAATAC AAAACCATCA GCAAACTGCC
GATCGCACCA AAACTCAGCT AAATAATATC GACCAGTACT TTAGCAGCTA CCCAGAGCTG
AGTGACCTTG ATACCGATAT GACAATCTTT GATAGTAGCT GTCAACGATT AAGGGCGCTA
CTAGAAGATA ACTCTGATTT TTCAGCAGCT AGAATTAGCC AACATAGCCT GGCCTGCCAG
CTACAAGCTG ATTTTGAGAT ATTATCCAAA CAGCAAAACA CTGATCTTTC ATTGATAGCG
CAGCGGCGCG AGCAACTGCT AAATCTACAG CAGCAGCAAG CAGTAGTCAC TCAAAACCAG
CCGCTTGCTA TTATGCGCGG TGAGCAAGAG CAAATCGAGC ACATCAGCGC ACAGATTGAG
CAAGTGAGAT TTAAGATTAA ACAACGGTTT GAGCTGACCC GTCAAATCCA TAAAATCAAT
CTCGCGCTAC CGGTATTGAA TCAGGAACTG ACGGTCTTAG ACGACTTAAT TGCCACTCAT
CGCGTAGATA TTCAGAGCAC GAAGCTTAAA AAACACGACA AGCAGACGCA CCTTGCTCTA
TTGCAAAAAG TCGCAAGGCT TGAAGATTAC ATCGTCGAGC TCAAAGATGG CACACCCTGC
CCGCTGTGCG GCGCGCATGA GCACCCTTAT GGTCAACATC ATCCGCTATT AGATGGTCAG
ATTGACAATA AACAAGCGTT GTCGCTGACG CAGCAGACCC AGCAGCAAAT ATCTGAGCTT
GAGACGCTCA TTGAGCATCT CGAACAAGCA TTATCTAAAC ATCATATCGA CCATGCTACT
AAGAATGAAG CCATTAACCA TCAACAGCAG CAGTTAGCCC CGTTACAGCA GCAGTGTGAG
ATGTTGGGCA AAGACATTCA AGATAGCCTG CTTTTACTTT TTGACGCCAA TAAAAATCAT
TCCAAAGCGA TTGCAGGGAG TGTCCATCCG CTTTATCAAC TGAGTGAAGA TATAAATAAA
CCTGACATTG ATAGTAATAG TGATATTGAA AGCACTTTAT CTTTACTAGA CAGCGCCAAA
CAAAAGCTAC TCGAGCAAAA GCAGTCTCTT AAAGACCTAT TAATTCAACA TGATGACTTA
ACGGCAAGCA TATCAGAGCT AAATATTGCT ATAAAGAGTG ATGAAAATCA GCAGCAGGTA
CTGATGAGCA AGTTAAATAA TCTGACGACG GATATCAAGC TACACTCGCA GAAAGCAGGG
ACCATTGAGG ATAAGATAGC CGCCAACTTT TTGGCATTAG CCGCTATTAC TAGCAGTATT
TTATCATTGG CAGATAAGTA TCCGGCGGAT AGCTATAGAG AATATTTGAG TATTGATTTT
CAAAGAACAG ACATTCAAAG CGCACTTAAG CAATTGGACG CTAGTATTGA TGAGCAAACC
ATACTAGATA GCAGCGACTA TGAGCGTCAT ATTAATAGAT TACGTCAACA ACGCAGCATG
CTAAGCCAGC TAAAAAAGCA TTTTAATGAG CAAAAAAATA GCCAGCAACA GCTAAGCAAT
ACATTGAGTA CGGTGCGCGC TCAAATTGAC ACCAAACAAG CTCAGCTCAC CTCTGATGAA
AGCGCTCTAA AAAGACTCGA ACACTTGATA GCGGATAAAA ATGTCGCTCT TGAGCAGGTC
AAGAGCGACA GGACTGCAAT TTTTGCAGAC AAAAACACAG AGTCTGAAGA CACACTACTG
CGCAGCGCAG TCGATGACGC AAAAGCCAAA CAGGCAAATG CTCAAAGACA GTTAGACAGC
ACGCAGCAAG TATTAGCGCA ATTGCAAAGC AGACAACGAC AGATATTGGC AGCATTGCAG
TCTGCTACGA CAGCACTGAA TACGCAACAA GCTGTATTTC TGGAGCATCT AGAAGCGGCG
CAGTTTATGG ATGAAGATGC TTTTATCCGT GCACGCCTGC CTAAAGAAGA GCGTGATGCT
TTACATCTCC GTAAACTTGC GATTGATAGT GCCTTGCAGC AGGCAAAGTC ACAGTTAGAT
AGCACCCAGC AATCATTAGA GCAGAACCTG TCTCTTGCTA TGACAAATGC CAGCCAAGAA
ACGATTGCTG CCCAACATCA GCACATTCAG ATGGAGATAG ATCAGCTCAG CCAACAGATT
GGTGCTATTG TTCAAAAGCT CAAAGACAAT GAGAACCAAA AAGGTCAACG AGCAGCCCAA
CTTACCGCCA TCAATGTGCA AAAAGAAAAA TTAAAAATTT GGCAGCAGCT GCATATTTTA
ATTGGTTCAG CGGATGGTAA GAAATATCGC ACCTTTGCAC AAGGCTTAAC CTTTGAAGTT
ATGATTAGCC ATGCCAATAG CCAATTACAA AAGATGAGTG ACCGCTATCT GCTGATTCAT
GATGACAGCA ATCCGCTTGA GCTTAATGTC ATTGATAACT ATCAGGGCGG CGATATTCGT
AGTACCAAAA ACTTATCCGG CGGCGAAGGC TTTATCATCA GTCTGGCGCT TGCCCTTGGA
TTGTCGCAAA TGGCCAGTCA CAATATCCGT GTGGATTCGC TGTTTTTGGA TGAAGGTTTT
GGCACGCTTG ATGAAGAGTC GTTGGATATT GCTCTAGATA CCTTGACTGG CTTGCAACAA
GAAGGGAAAT TGATTGGTAT AATCTCTCAC GTACAGGCGT TAAAAGATCG TATCTTGACC
CAAATAAAGG TTGAAAAAAT ATCTGGCGGC TTTAGCCAAA TCAGCGGTCA AGGGTGTCGG
CGTATTGTGA ATGACAAAGT ATAA
 
Protein sequence
MRLIELRLKN LNSLKGEWHI DFSDAAFLNE GIFAITGQTG AGKTTILDAI CLALYSQTPR 
LGDITGSTNE IMTQGTGECS AEVIIEIDAK RYQCSWYQHR AHKKAKGNLL PIKHEISEVK
SGKILEEKKS KTSAYIQALI GMDFSQFTRS IMLAQGSFAA FLKSDIGDRA AILEKITGTA
IYAKISLNVH EKKRFEEDVL SKLQAGVDGL SLLSIEDENL QAAELKALNQ QQSTQRQSFK
TLSEQLQWLN NVQQLQNNLS IYQSEFATAQ QAQQAFVPEA KRLSIANKAL EIDSQFRELS
YSRETVKKLD VEQQSLLSQI PAQQQALAQA ACHLDDANTL GKQAADNLQT NLPVIAQVRE
LDHNIRQQSQ SLVEYNQRKD LLVGNAQILC QEIQNHQQTA DRTKTQLNNI DQYFSSYPEL
SDLDTDMTIF DSSCQRLRAL LEDNSDFSAA RISQHSLACQ LQADFEILSK QQNTDLSLIA
QRREQLLNLQ QQQAVVTQNQ PLAIMRGEQE QIEHISAQIE QVRFKIKQRF ELTRQIHKIN
LALPVLNQEL TVLDDLIATH RVDIQSTKLK KHDKQTHLAL LQKVARLEDY IVELKDGTPC
PLCGAHEHPY GQHHPLLDGQ IDNKQALSLT QQTQQQISEL ETLIEHLEQA LSKHHIDHAT
KNEAINHQQQ QLAPLQQQCE MLGKDIQDSL LLLFDANKNH SKAIAGSVHP LYQLSEDINK
PDIDSNSDIE STLSLLDSAK QKLLEQKQSL KDLLIQHDDL TASISELNIA IKSDENQQQV
LMSKLNNLTT DIKLHSQKAG TIEDKIAANF LALAAITSSI LSLADKYPAD SYREYLSIDF
QRTDIQSALK QLDASIDEQT ILDSSDYERH INRLRQQRSM LSQLKKHFNE QKNSQQQLSN
TLSTVRAQID TKQAQLTSDE SALKRLEHLI ADKNVALEQV KSDRTAIFAD KNTESEDTLL
RSAVDDAKAK QANAQRQLDS TQQVLAQLQS RQRQILAALQ SATTALNTQQ AVFLEHLEAA
QFMDEDAFIR ARLPKEERDA LHLRKLAIDS ALQQAKSQLD STQQSLEQNL SLAMTNASQE
TIAAQHQHIQ MEIDQLSQQI GAIVQKLKDN ENQKGQRAAQ LTAINVQKEK LKIWQQLHIL
IGSADGKKYR TFAQGLTFEV MISHANSQLQ KMSDRYLLIH DDSNPLELNV IDNYQGGDIR
STKNLSGGEG FIISLALALG LSQMASHNIR VDSLFLDEGF GTLDEESLDI ALDTLTGLQQ
EGKLIGIISH VQALKDRILT QIKVEKISGG FSQISGQGCR RIVNDKV