| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1049 |
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| Symbol | hrpA |
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| ID | 3514935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1241380 |
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| End bp | 1245651 |
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| Gene Length | 4272 bp |
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| Protein Length | 1423 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669739 |
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| Product | ATP dependent DNA/RNA helicase |
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| Protein accession | YP_264336 |
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| Protein GI | 71065609 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.302189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA TTCTAAGAGA TAATCAAGAA AGCAACCAAC ATGTACAAGC TGAAAATTTG
AACGTTAATG TAAACACTAA ACAGCAAGAG AATACAAAAC CTCAAAACGC TGTTTCTTTT
GAGAGGTTAC CTGTGCTTGC AAAAGATGAG TATCATCTCA GTCGCCTTGA GCGTGAGCTG
GCACGTGCGA AATCGTCTAA AAAGCCGGCT GCTAATCAAA ATACCAATAC AGATGACAAA
CACGACGCTA AAAATAGCAA TGATTTGGAT AAAAAACGCG CTCAATATGA ACAGTTAAAA
ACCCGCTCAC AACAAGCGGT GCAAGCGCGT ATAGATAGTA TGCCAAACAA ATTGGCAGAG
AAACTGAATC TAGATTTACC CGTTAGTCAA CGTGCTGATG ATTTAATCCA GGCCATTATA
GATAATCAAG TGATTATTGT CGCTGGCGAG ACAGGCTCAG GTAAAACGAC CCAACTGCCT
AAATTAGCAA TGCTAGCAGG GCGTGGTATA CGTGGGCAGA TAGGACATAC ACAGCCACGA
AGATTGGCAG CTCGAAGTGT CGCTAACCGA ATTGCGGAAG AGTTGGGTGA GCAATTGGGG
AATACTGTCA GCTTTAAGAT TCGCTTTAAT GAGCAGGGCA CGGCACAATC AGTCGTTAAG
CTCATGACTG ATGGTATCTT GTTGGCTGAA TTGGGTCATG ATCGTTTTTT GAGTAAATAC
GATACTATTA TTATCGATGA AGCACATGAG CGTAGCTTAA ACATCGACTT TATTATGGGT
TATCTTAAAA AATTGCTGCC CAAGCGCCCT GATTTAAAAG TTATTATTAC TTCTGCAACG
CTTGATACCA AACGCTTTAG TGAATACTTT AGCCGCTATG ACAATAAGCT GAAGCGTAAC
ATACCGGCGC CTATCTTCAA TGTTGAAGGA CGAAGCTTCC CTGTCGAAGT GCGTTATCGT
CCCTTGACAG ATGAGCCGGT AACCAGCTCG GATGATGACA GCTATGACGA TTTTGAAGAG
AACCTGCCGC GTGCGGTCGT TGCTGCTGTA GAGGAATGCT TTAGCGATGC ACAAAATAAA
GGTCATGCTG ACCAAGCAGA TATTTTGATA TTTGCGGCGA CTGAAGCTGA GATACGTGAG
CTACAAGAGG TGCTTGAGCG TCATGGACCT AAGCATACCG AAGTACTGCC ATTGTTTGCA
CGTCAGACTT ATGAAGAACA GCAGCGTATC TTTCAGCCTT CAGGTCGCGG TCGGCGCATT
GTTATTGCCA CCAACGTCGC CGAAACGGCA TTGACCGTAC CCGGTATTCG TTATGTGATT
GATTTGGGTT TTGCGCGTAT TTCACGCTAT TCGTATCGCT CACGTGTACA GCGCCTGCCG
ATTGAGGCAA TATCGCAAGC AGCCGCTAAT CAGCGTAAAG GTCGTTGTGG TCGTGTTGCG
CCGGGCGTTT GTATTCGCTT ATATAGTGAT GAAGATTTTA CTGGTCGTCT AGAATTTACA
GAACCTGAGA TTTTACGCAC CAATTTAGCC TCAGTTATTT TGCAGATGGC AAATCTGCGC
CTAGGTAGCG TTGATGACTT TGAATTTATT GAGCCGCCTG ATAGTCGTTT AGTTACCGAT
GGGCATAAAC TGCTAAATGA GCTTGGCGCG ATTGTCGAAA AAGATGAGCA AGCGGTTAGC
AATGTAAGCA ATAAGTCAAA ACGACAAGGT CTCGATCATT TAAAATTGAC TCGTATCGGG
CAACAGATGG CACGTATGCC AATCGATCCA AGGCTGGCGC GTATGCTAGT CGCTGGCTCC
GACTTTGACT GTATCCGTGA AATGCTGATT GTGGTTGCCG CGCTTGCGGT GCAAGACCCA
CGCGAGCGTC CGGCGAATAA GCGCACTCAA GCCGATCAAA AGCATGCAGA ATTCCGCCAA
GATGACTCCG ACTTCTTATT TTATTTAAGT TTATGGAAAG CGCTGTTTGA AAAAGACGAG
GACGGTAATA AGTTGTCTGG CAATCAGCGA AAACAGTTTA CTAAGAAAAA CTATCTTAGC
TTTCCGCGGG TACGTGAGTG GCAGCAGACC CATCGCCAGC TGGTGCAAAT GGTTACCGAG
CTTAAACTGA ATGATGATGC TATTAATCCC AAATCTAATA CTGAAAATGC TGAATTAGCC
AATAGTGATC CAACGGGCGT CGATGATGAA GCGTTAAAAG CGGTTAAATA TGCCAATTTG
CATAGAGCTT TATTGACAGG CTTATTGTCC ATTATCGCCC ATAAAACTGA AAATCGTGGC
GAATATTTAG CAGCTCGTCA GCAAAAAGCC AAAATATTCC CAGCCAGTAC GGTATTTAAG
CAAATACCGC CGTGGGTCAT GGCGTTTGAG ATGGTCGAAA CCTCACAAGT ATTTATGCGC
ACTGTTGCCA AGATTGAGCC AGAATGGATT ATCTCGGCTG CCGGTAACTT ATTAAAATAT
CACTACTTCG AGCCGCATTG GTCGAAAAAA ACCGGTCGCG TCAAAGCTTA TGCTCAGATT
AGTCTATTCG GTCTTATTAT TATCAGTAAG CAGCTGACCA ACTATGAGCA AGTCAATTTA
AGTGAGTCGC GCGAGATATT TATTCGAGAT GGTCTGGTTA CTGGAAATTT AGGTAGACAA
GCACCATTCT TACAGCACAA TATGGATAAA ATTGCTGACA TTGAACGCAT TGAGGATAAA
TTACGCCGCC GTGATTTATT GGTCGATGAA GAATCCTTGT ATCAGTTTTA TGATAAAAAA
ATTCCTGAGC ATATTGCAAG CCGTAAAACG TTTGAAGACT GGCGTGTTGA GGTTGAAAGA
ACCGATACTC AATACCTGTT CTTTACCGAT GAGGACGTGC TTAATAGCCA AGCACCGACT
ACAGGCGATT TTCCAGAAAT ATGGAAGCTT GGCGATTTAA AACTGCCATT ACGCTATATC
TTTGATCCAG CAAGCGATGA CGATGGGGTG ACCATCCGTG TGCCGCTTGT CGCGCTACCG
CAGCTTGACG CGATTGAGCT ATTATGGGGC GTACCGGGCT GGCGTTTTGA GCTGGTCCTG
CAATTATTGA AATCATTACC AAAAGACATT CGTCGTCAGA TTGTACCTAT TCCTGATACT
GCCGATAGTT TGTTTGATGA GTTGCAGCCT GCGGGTGGAC AGGGATTATT AAAACAGCTT
TGCCAAGCAC TTAACCGCCG TGGCATTATG TCGGTCACCC CAGAGCATTT TAATCCGTCT
AGTATTGATC GTTATTTGCA GCCGCAAATC TGCGTGGTTG ATGATAAGAA CCGTATCATT
GAAAAAGGTC GCGATCTACA AACATTGCAG ATTCGCCATG CCTCTCAGAC TCGCCAAGCG
GTGAATGAGC AGCAAGGCGC GCATACAGAA TTTCCTGAAC ACTTCGCCTT TAGTAAAAAC
CATCATAGCG CAGGCGTGGT CATGAAACAG TTCGCCGCTT TGGTCACTGA CGAGGCAGGT
GAAGCAGTAT CTATCCATCA ATATACCGAT GTCAACGCAG CATTGCAGGC GCACCGTATT
GGGGTCTTAA CCTTAATCAA AAGCAAACTT GGGTCAAAGA AAAAACAGCT GACTAGTCAA
GTCGATAACA TATTCAAACT GGCATTTGCG CCCCTTGGTG ATATGGAAAA GCTGAAAACC
ATCATCATTG ATGCGACTCT AGATGCAGCG CTTGAAGAGC ATTATGTATT GTTTGATCAT
ACGGCAGACA TACCTGAAAG TGCGGATGAT ATTGCGGTTG GGCTCAGCGA GGAGTTGCCA
TTTACTCCTG AAGAATACAG CCAAACGCTC GATGTGGTGC TAAGTAACTT CTTGCTGATC
GGTCAAACGA TCATAAAAAC GCTCAAAAAC GTCTATACCC GCTGGCAGCG TATCCGCCAA
AGCCTGCTGA TGCTTGATCG AGAGATATTT GGTGAGTCTA TCGAAGATAT TGAGGATCAG
TTAGGAGATT TACATTTGGC TGATTTTGTT TATCGCATGG ATTACAGCCA CTGGCAACAG
TATCCACGCT ATCTGGAGGC GCTAGAGATT CGTATCGACC GCCTTGAGCA CAATATCGAA
GCTGACCTAG ATGGTGTCTA TGCACTCGAT TTGCATATGG AGCGACTGGC AGGACGTGCT
AATGATAAAG CCATCAGCGA TTACCGCTGG ATGGTCGAGG AGTATCGCAT TCAACTGTTT
GCTCAGCCGA TGAAAACCCG TATGGCGGTA TCACCCAAGC GTCTTAGTAA GATATGGGAT
AAAATGAGCT AG
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| Protein sequence | MPDILRDNQE SNQHVQAENL NVNVNTKQQE NTKPQNAVSF ERLPVLAKDE YHLSRLEREL
ARAKSSKKPA ANQNTNTDDK HDAKNSNDLD KKRAQYEQLK TRSQQAVQAR IDSMPNKLAE
KLNLDLPVSQ RADDLIQAII DNQVIIVAGE TGSGKTTQLP KLAMLAGRGI RGQIGHTQPR
RLAARSVANR IAEELGEQLG NTVSFKIRFN EQGTAQSVVK LMTDGILLAE LGHDRFLSKY
DTIIIDEAHE RSLNIDFIMG YLKKLLPKRP DLKVIITSAT LDTKRFSEYF SRYDNKLKRN
IPAPIFNVEG RSFPVEVRYR PLTDEPVTSS DDDSYDDFEE NLPRAVVAAV EECFSDAQNK
GHADQADILI FAATEAEIRE LQEVLERHGP KHTEVLPLFA RQTYEEQQRI FQPSGRGRRI
VIATNVAETA LTVPGIRYVI DLGFARISRY SYRSRVQRLP IEAISQAAAN QRKGRCGRVA
PGVCIRLYSD EDFTGRLEFT EPEILRTNLA SVILQMANLR LGSVDDFEFI EPPDSRLVTD
GHKLLNELGA IVEKDEQAVS NVSNKSKRQG LDHLKLTRIG QQMARMPIDP RLARMLVAGS
DFDCIREMLI VVAALAVQDP RERPANKRTQ ADQKHAEFRQ DDSDFLFYLS LWKALFEKDE
DGNKLSGNQR KQFTKKNYLS FPRVREWQQT HRQLVQMVTE LKLNDDAINP KSNTENAELA
NSDPTGVDDE ALKAVKYANL HRALLTGLLS IIAHKTENRG EYLAARQQKA KIFPASTVFK
QIPPWVMAFE MVETSQVFMR TVAKIEPEWI ISAAGNLLKY HYFEPHWSKK TGRVKAYAQI
SLFGLIIISK QLTNYEQVNL SESREIFIRD GLVTGNLGRQ APFLQHNMDK IADIERIEDK
LRRRDLLVDE ESLYQFYDKK IPEHIASRKT FEDWRVEVER TDTQYLFFTD EDVLNSQAPT
TGDFPEIWKL GDLKLPLRYI FDPASDDDGV TIRVPLVALP QLDAIELLWG VPGWRFELVL
QLLKSLPKDI RRQIVPIPDT ADSLFDELQP AGGQGLLKQL CQALNRRGIM SVTPEHFNPS
SIDRYLQPQI CVVDDKNRII EKGRDLQTLQ IRHASQTRQA VNEQQGAHTE FPEHFAFSKN
HHSAGVVMKQ FAALVTDEAG EAVSIHQYTD VNAALQAHRI GVLTLIKSKL GSKKKQLTSQ
VDNIFKLAFA PLGDMEKLKT IIIDATLDAA LEEHYVLFDH TADIPESADD IAVGLSEELP
FTPEEYSQTL DVVLSNFLLI GQTIIKTLKN VYTRWQRIRQ SLLMLDREIF GESIEDIEDQ
LGDLHLADFV YRMDYSHWQQ YPRYLEALEI RIDRLEHNIE ADLDGVYALD LHMERLAGRA
NDKAISDYRW MVEEYRIQLF AQPMKTRMAV SPKRLSKIWD KMS
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