| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1038 |
|---|
| Symbol | |
|---|
| ID | 3515038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1228674 |
|---|
| End bp | 1229453 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637669728 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_264325 |
|---|
| Protein GI | 71065598 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.769751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTC GTATTCACCC AATCAAAGCG TTCAATGACA ACTACATTTG GATATTAATT
AATGAGAGTA ACAAGCAAGC CATTGTCATT GATCCAGGTC AAGCGGCACC AGTCGTTGCT
TACTTAGAAG AAAGTGAGTT AGAGCTGACC TCAATTTGGA CGACTCATCA TCATTATGAT
CATATCGGCG GCGTCGCAGA GTTACAAGAG TCTTATCCGA TGACGCATTT GGTCGCGCAT
ACTGAGCATA ATGTCGATGA AGATCAGACC ATAAAAGATG GGAGTACGGT AAGTGCGTGG
GGTTGCTCTG TGCAAGTGTG GGATGTGTCC GGTCATACCG CCAGCCACGT GGCTTATATA
TTAGATATCG ATGGCAGTAA GCACTGCTTT TGTGGTGACA CCTTATTTAG TGCTGGTTGC
GGACGGGTTT TTACTGGGAC AATTGAGCAG TTGCATGACA GCTTTGAGCG TCTAAATGGA
CTGCCAGCTG ACACGCTGCT GTATCCTGCG CATGAATATA CTGCAAGTAA TCTACGTTTT
GGGTTGTCGA TTGAGCCTGA TAATGAGGCG ATGCAGCAAG CCCTGGCACA AGCTGAAGAT
ATAACGGCAC AAGGTATTCC GACATTGCCG GTTACTCTAG AGCACGAGCG TGCGATAAAT
GTGTTTTTGC GCACACAAGA GGCAAGTGTG ATAGCAGGGG TGAAATCTGA AATGAATATT
GAGGATGAAA AGTCTTTGAC TATATTTGCC GCATTACGTG AACTTAAAAA TAACTTCTAG
|
|---|
| Protein sequence | MSIRIHPIKA FNDNYIWILI NESNKQAIVI DPGQAAPVVA YLEESELELT SIWTTHHHYD
HIGGVAELQE SYPMTHLVAH TEHNVDEDQT IKDGSTVSAW GCSVQVWDVS GHTASHVAYI
LDIDGSKHCF CGDTLFSAGC GRVFTGTIEQ LHDSFERLNG LPADTLLYPA HEYTASNLRF
GLSIEPDNEA MQQALAQAED ITAQGIPTLP VTLEHERAIN VFLRTQEASV IAGVKSEMNI
EDEKSLTIFA ALRELKNNF
|
|---|
| |