Gene Psyc_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1036 
SymbolserC 
ID3515036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1225386 
End bp1226507 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content45% 
IMG OID637669726 
Productphosphoserine aminotransferase 
Protein accessionYP_264323 
Protein GI71065596 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01364] phosphoserine aminotransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.327892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACAA ACGCAGCCTC TACAATTGAA CATCACCGTT TACCTAACTT TTCGGCTGGA 
CCTGCTACGA TACCGACCGC TGTATTATCA CGTGCTCAAG CAGAGTTGCT TGACTGGCAA
GGACGTGGCG TATCGGTGAT GGAAATCAGC CATCGTAGTA AAGAGTACAT CGCCATTACT
GAAAAAGCGG AAGCCAAACT GCGTTCATTG ATGGACATTC CAGACAATTA TAAAGTGCTG
TTTTTACAAG GCGGCGCTAG CTTACAGTTT TCAGCCATTC CATTGAACCT GTTAAATGGT
GGGCGCGCAG ACTATCTAAC GACGGGCGCT TGGTCAGGTA AAGCGATTAA AGAAGCACAG
CGTTATGCCA ATCTAGGCCT TGGTGAGGTT AATTTGGTTG CCACAGGCAA AGACAGTCAC
TTTACTGATG TGCCAGCCCA AAGTGACTGG AACCTGAGCA AAGATGCGGC GTATTTCCAC
TACTGTGCCA ATGAAACTAT TCATGGTTTG CAAGTATTTG AGCCACCACA AGTTGATGCG
CCCATTATCG TTGATATGTC ATCTTGCATT TTGTCACAGC CGATTGATGT GTCTAAATTT
GGGATGATTT ACGCCGGTGC ACAAAAAAAT ATCGGCCCAG CAGGACTGAT TATTGTCATC
ATTCGCGAAG ACTTATTAGG GCAGGCAAGT GAGTGGTGCC CGCTACTAAT GAATTATGAA
CATCAAGCCG AAAAAGAATC TATGTCAAAC ACGCCAGCGA CGTATTCTTG GTACTTGGCA
GGGCTGGTCT TTGATTGGTT AGAAGAGCAA GGCGGCGTTG CTGCTATCGG CAAAATCAAT
CAACAAAAAG CGGATTTGCT CTATAAAACG ATTGATGATA GTAGCTTTTA TAGCAATCCA
GTCGACCCTA AGTATCGTTC TATCATGAAC GTGCCGTTTA CGTTGGCTGA CAGCAGTCTT
GATAAGGTAT TTCTAGAAGA GTCAGCGGCA GCAGGTTTAC TGCATCTAAA AGGTCACCGA
GATGTCGGTG GTATGCGTGC CAGTATCTAC AATGCGGTGT CGTTAGACTG GGTACAGCAA
CTGGTCGACT TTATGATTGC GTTTGAAAAG AAACACGCTT AA
 
Protein sequence
MSTNAASTIE HHRLPNFSAG PATIPTAVLS RAQAELLDWQ GRGVSVMEIS HRSKEYIAIT 
EKAEAKLRSL MDIPDNYKVL FLQGGASLQF SAIPLNLLNG GRADYLTTGA WSGKAIKEAQ
RYANLGLGEV NLVATGKDSH FTDVPAQSDW NLSKDAAYFH YCANETIHGL QVFEPPQVDA
PIIVDMSSCI LSQPIDVSKF GMIYAGAQKN IGPAGLIIVI IREDLLGQAS EWCPLLMNYE
HQAEKESMSN TPATYSWYLA GLVFDWLEEQ GGVAAIGKIN QQKADLLYKT IDDSSFYSNP
VDPKYRSIMN VPFTLADSSL DKVFLEESAA AGLLHLKGHR DVGGMRASIY NAVSLDWVQQ
LVDFMIAFEK KHA