Gene Psyc_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1034 
Symbol 
ID3515034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1222376 
End bp1223710 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content44% 
IMG OID637669724 
Productphage integrase 
Protein accessionYP_264321 
Protein GI71065594 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.288738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.327892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAG CCTTTTTAAC TCACTGCTAT TGCATACCGT TCCAAACTGT TGCAATCTAT 
GTCAAATCAA GTGGTAATCA AACGGTAATC AAAATGGCTA ACCAAAAATT AAAAGATGCT
GGCATTAAAA CCGACTCACA AATCAAACAA GCTATCAAAG AGCATGACAG CGGTGATGAA
GTTTACACTA TTCAAGGTTA TAAAGGTTTG AATCTTTATA TTCGAGATAA TAAGACTACT
ACATTTCGCC ATCGATTTAC TAGCCCTGTT ACGGGCAAAC GTAAAAACTT TACCCTGGGC
GCCTATCCCG TTTTTACACT TGAGCAAGCC CGTGATATGT ACCGCAATAA TTTATCATTG
TTAGCTGGCG GTATTGATCC GGTATTTCAC CATCAAGATG CTCACAATAA AAAGCGAGCT
ATGCCAACAT TCAGCGAGTT GGCAGATGAG TGGCTGCAAT CACAGATAGC GTCAAAACAG
TTTGAGCATC GTACTATTGA GCAAAAGCGC ACACATATCG CTTATGCTGC AGCATATATC
GGGCGCATGC CTATTGATCA TATTAAGACG CCTGATGTAC TGCGAGCAAT CAAAGATATT
GAAAAGAAAA CCATACCGAC GGCCAAGCGC GTACGCGGTG TATGTCAGCG CATTTTTGCA
TTAGCTATCG GGCAAGGTTA TATTGATAAC AACCCTGCTA TAGCTGTGGC TGACTTAATG
CTGCCAAAGC CAAAGACAGA ACACCATCAT GCGATTATTG AGCCTATAGC GTTTGGCAAG
TTATTAAGCG ATATTGATAG CGTCACTGAT TTTTACGGCC ATGCTCAAAA CATACTAAAG
CTGCAAGCTC TGCTGTTCCA GCGTAACGGT GATATGTGCT CAATGCGTTG GGATGCTATC
GACTTTGACG CTAAGACATG GACGTTCAGC CCACAGAAAA CGGGCAACCG TGGCGATATG
GTGGCTAGCC TAGTAGTACC GCTACCAACA CAAGCTATCG AGCACTTACG AGCACTTCAC
GCACTTACGA GCAAAACGCC ATACGTGTTT TATAATAGTA GGCGCAAAGA AAAATTTGAG
CATCAGCAAC AGCTCAACAA ATTCTTGTGG CGATTAGGAT ATAAAGACGT TCACACGCCT
CATGGGTTCC GCGCATCTGC TCGAACGCTA ATGGTTGAGC AATTAGGTAT TAGTGAGACG
TTGGCAGAAT TACAGCTTGG CCATAACGTG CGTGACGCCA ACGGCCGTGC CTATAATCGT
GTGACAATGA TTGATAAGCG TAGAGACATG ATGCAGCGTT GGGCGGATTA TTTAGACCAA
CTTAGACGTG TTTAG
 
Protein sequence
MITAFLTHCY CIPFQTVAIY VKSSGNQTVI KMANQKLKDA GIKTDSQIKQ AIKEHDSGDE 
VYTIQGYKGL NLYIRDNKTT TFRHRFTSPV TGKRKNFTLG AYPVFTLEQA RDMYRNNLSL
LAGGIDPVFH HQDAHNKKRA MPTFSELADE WLQSQIASKQ FEHRTIEQKR THIAYAAAYI
GRMPIDHIKT PDVLRAIKDI EKKTIPTAKR VRGVCQRIFA LAIGQGYIDN NPAIAVADLM
LPKPKTEHHH AIIEPIAFGK LLSDIDSVTD FYGHAQNILK LQALLFQRNG DMCSMRWDAI
DFDAKTWTFS PQKTGNRGDM VASLVVPLPT QAIEHLRALH ALTSKTPYVF YNSRRKEKFE
HQQQLNKFLW RLGYKDVHTP HGFRASARTL MVEQLGISET LAELQLGHNV RDANGRAYNR
VTMIDKRRDM MQRWADYLDQ LRRV