Gene Psyc_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1000 
Symbol 
ID3515000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1192502 
End bp1192975 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content45% 
IMG OID637669690 
Productphage protein 
Protein accessionYP_264287 
Protein GI71065560 
COG category[S] Function unknown 
COG ID[COG5556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0022845 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACCC TTAATAATAA GGTTAAGGCC TTTATTGTAC AAGGGCTTGC TACCTATATG 
ACACCTTCAG AAGTAGCACA GGCTGTCAAA GAAGAATTCG ATATTGTCGT AACCCGTCAG
CAAGTCTCAT TCTATGACCC AAGCAAGGCA GCCGGACTTA CGCTATCCAA AAAATGGGCA
GACCTATTCA AACAATTCCG TGATGACTTT AATACTGATA TTCAGGCAAT ACCGATTGCT
AATAAAGCTT ATCGATTGAA CATGCTTGAC CGCATGGCAC GTGATGCTGA GAAGTCAAAG
AACAGGCCGT TGGCGGCAGC TCTAGCAGAA CAGGCAGCCA AAGAGGTTGG TGAGGTTTAT
ACCAATAAGC AGAAGGTCGA TAACACATCT AGCGACGGCT CAATGGCTAC CAAGCCGACA
GTAATTAGAC TGGTAGCACC AAAGGTAGAT GAAAATGGGC GAGCTATTAA ATGA
 
Protein sequence
MATLNNKVKA FIVQGLATYM TPSEVAQAVK EEFDIVVTRQ QVSFYDPSKA AGLTLSKKWA 
DLFKQFRDDF NTDIQAIPIA NKAYRLNMLD RMARDAEKSK NRPLAAALAE QAAKEVGEVY
TNKQKVDNTS SDGSMATKPT VIRLVAPKVD ENGRAIK