Gene Psyc_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0977 
Symbol 
ID3514919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1172655 
End bp1173371 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content45% 
IMG OID637669666 
Producthypothetical protein 
Protein accessionYP_264264 
Protein GI71065537 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.21947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000157604 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACA TTCTAACTGG TAAAGCCGCT TTCGCCACTG GTACAGCCTG TCTAATGACC 
ATGCTGATGG GGACTGCCCA TGCAGCGCCC ACAGGCTACG ATCAGCTTGC TTTTCAAACA
GAAGTAAAAG AAGAAATTCA AAATGACGAG GTCACTGCCA GCTTATACAA AAAAGCACAG
GCAACCGATG CAAAAGCATT GGCAACCACA CTAAACACTT CGATTAATAA TGCGTTAAAA
ATCGCTAAAC GCTACCCGAC TGTCACGGTA AGCACTGGTC AACAACGTAC TTATCCACGT
TACGATAAAT ACAATAAAAT CATCGGCTGG ACAGGACAGG CAAATATAGA CCTAAAAAGT
ACCGATTTTA CAGCAACCAG CCAACTGATT GCTGATTTGC AAGAAACCTT GGTCATGGAA
AATCTCAGCT TTGGGGTCTC AGATATCAAA AAGAATGCGT TACAGCAGAA ACTGATGACC
GATGCTTCAC GCGCCTTTCA GCAGCAGGCT AAAAATATGA CCCGTGCTTG GGATGCACGC
AGCTATCGTG TCGTCAATGT CAATCTAAAC ACTGGCAGCA ACTATCCGCG CCCGATGTAT
AATGCCATGA GCATGAAAGC TGAGTCGGCA GATGCATCGG TACCAAGCCA AAATTTTGAG
TCTGGTAACA GCACCATCTC AGTGACTGCC AATGGTACGA TTGAGTTGAC TAAATAA
 
Protein sequence
MKNILTGKAA FATGTACLMT MLMGTAHAAP TGYDQLAFQT EVKEEIQNDE VTASLYKKAQ 
ATDAKALATT LNTSINNALK IAKRYPTVTV STGQQRTYPR YDKYNKIIGW TGQANIDLKS
TDFTATSQLI ADLQETLVME NLSFGVSDIK KNALQQKLMT DASRAFQQQA KNMTRAWDAR
SYRVVNVNLN TGSNYPRPMY NAMSMKAESA DASVPSQNFE SGNSTISVTA NGTIELTK