Gene Psyc_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0966 
Symbol 
ID3514373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1157154 
End bp1158038 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content49% 
IMG OID637669655 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_264253 
Protein GI71065526 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.373611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.312631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGTT TTTTTTATGC TGTTAATGAT CATAGCAACC CATCAGAGAC CACTTACCCT 
CAGCTCAGCA GCTTATCTAT CGGTGATAGT GTCGAATTAA CAGAGAGCAT TGTCCATCAC
TGGTGCCGTG TATTACGTGC CAATATTGGT GACCAAGGTA TTTTGTTTGA TGGCTTCGGC
GGTGAGTATC AGGTACAGCT ACTAGCCATC AGTAAAAAAC ACGCTACTGT GACCCTGCTT
GCTCATACAC ATGATGATCG TAGTGCAGCG ACATTTACCA AAATCGGACT GGTGATGAGT
CGCGGCGAGC GAATGGATTA CGCGATTCAA AAATCCACTG AGCTTGGGGT CACTGCCATT
CAGTTGCTAA GCAGTCATCA TGGCGAGGTC AATCTAAAAC CTACCCAAGT GGAGAAAAAA
CTGGCGCATT GGCAGCAGGT CGCGATTGCC GCTTGTGAGC AATGTGGACT CAATCGCCCG
CCTCTTATTC TTGCTCCTAT TGCCATTAAC GATTGGCTTA AGCCTGTCAC AACGACCACG
CCTGTAGAAA TGGAAGCGGC CGTCAGCCCT ATGGTCACCA CCCTTAGTCA GGATACTTAT
TATCAAGTAT TACAGCAACC CGCTGATTTG CGTCTACAGC TTAGTGTACC AGCGGCAGGA
CAACCTGCTA TGCCTGATTC GCTATTGACA ACATTGCAGC AGCCAGCCCC TTATATTGAG
TTATTGATTG GTCCTGAGGG CGGATTAAGT GATGAGGAAT GCAAGCAGGC ACAAAGTGTC
GGGTTTGAGC CTTGGCAAAT TGGCGCAAGG GTGTTACGAA CAGAAACCGC ACCAGTGGTC
GCCTTGGCAA CATTGCAGGC GCTATTGCCA TGCAATAAAC CTTAG
 
Protein sequence
MRRFFYAVND HSNPSETTYP QLSSLSIGDS VELTESIVHH WCRVLRANIG DQGILFDGFG 
GEYQVQLLAI SKKHATVTLL AHTHDDRSAA TFTKIGLVMS RGERMDYAIQ KSTELGVTAI
QLLSSHHGEV NLKPTQVEKK LAHWQQVAIA ACEQCGLNRP PLILAPIAIN DWLKPVTTTT
PVEMEAAVSP MVTTLSQDTY YQVLQQPADL RLQLSVPAAG QPAMPDSLLT TLQQPAPYIE
LLIGPEGGLS DEECKQAQSV GFEPWQIGAR VLRTETAPVV ALATLQALLP CNKP