Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0938 |
Symbol | |
ID | 3514900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1123872 |
End bp | 1124621 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669627 |
Product | hypothetical protein |
Protein accession | YP_264225 |
Protein GI | 71065498 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.879867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGGCC ATTCAAAATG GGCAAATATC AAACACCGTA AAGCCCGTCA GGATGCGGTA AAAGGCAAAG TATTTACCAA GATTATTCGT GAAATTGTTT CTGCTGCCAA GCAAGGTGAT CCTGACCCTG ATAAGAATCC ACGCCTACGT GCTGTCATTG AAAAAGCCCT GTCCGTCAAT ATGACGCGAG ACACCATCAA CCGTGCGGTA GCCCGTGGTA CAGGTGGCGA TGACAATGAC AATATGGACG AAGTGAGCTA TGAGGGCTAT GGCATCGGCG GCGTCGCGGT ACTGGTCGAA ACCATGACCG ACAATCTCAA CCGAACGGTC AGTGAAGTAC GCCATGCTTT TACCAAAAAT GAAGGCAATC TTGGTACTAC TGGTTCGGTG GCTTATCTCT TTAATAAGCG CGGTGAAATC AGCTTTAATG ACATAAGCTT AGAAGATGAA GTCATGCTAG TGGCATTAGA TGCAGGCGCA CTTGATATCG AAAATGATGG CAAAAGCTTG CTTGTTATCA CTGAATGGGA AAATTTCGGT CATGTCAAAG ATGCGCTTAA TGCGGCAGGC TTAGTCTCCG ACAATGCTGA AGTGACCATG TCGCCATCAA CCAGTGCTGA AATAGACAAC GTTGAAGATG CCGAAAAAGT CATGAAGATG ATTGATATGT TAGAAGATAT CGATGATGTG CAAGAGGTTT ATAGCAACGT CAATTTCTCA GACGAAGTCA TGGCACAGCT TGAGCAATAA
|
Protein sequence | MAGHSKWANI KHRKARQDAV KGKVFTKIIR EIVSAAKQGD PDPDKNPRLR AVIEKALSVN MTRDTINRAV ARGTGGDDND NMDEVSYEGY GIGGVAVLVE TMTDNLNRTV SEVRHAFTKN EGNLGTTGSV AYLFNKRGEI SFNDISLEDE VMLVALDAGA LDIENDGKSL LVITEWENFG HVKDALNAAG LVSDNAEVTM SPSTSAEIDN VEDAEKVMKM IDMLEDIDDV QEVYSNVNFS DEVMAQLEQ
|
| |