Gene Psyc_0899 details

Gene Information

• Locus tag: Psyc_0899
• Symbol: prpE
• ID: 3515139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychrobacter arcticus 273-4
• Kingdom: Bacteria
• Replicon accession: NC_007204
• Strand: +
• Start bp: 1075851
• End bp: 1077896
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637669588
• Product: propionyl-CoA synthetase
• Protein accession: YP_264186
• Protein GI: 71065459
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02316] propionate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCGC AAACCGCCAC TGCAGTGACC AATCAAACGT CAACCCAAAC GTTTCAGAAA 
CCAACTACCA CTCAAAACTT TGCTGATATT TATCAGTCTT CTATTGAAAA CAAAGAGCAG 
TTTTGGGCAG AGCAAGCTAA GCGTATCTAT TGGCACAAAG AGCCTGAGCA GATTCTTGAT 
GACAGTAATT TGCCATTTGC GCAGTGGTTT GTCGGCGGCG AAACCAATCT TTGTTATAAC 
TGTGTCGATC GTCACCTTGA AGAACGTGCA GAGCAAGATG CCTTTATTTG GCTGTCATCA 
GAGATTAATC AAGAACTCAT AGAAACATAT CCTGCTGTGA TCGATGCTTT TAAAGACTTG 
GGGAATAACG TTGAGTTTTA TACCGACTAT ACTAAGCGCC GTTTGACTTA TAATGACCTT 
TATAAAGAAG TTAATTATTT TGCAGACGTA TTAAAGCGTC ACGGTATTGA GAAGGGCGAT 
CGTGTCATCA TTTATATGCC GATGATTTTA GAGGCAGCTT ATGCAATGCT CGCATGTGCG 
CGTATCGGTG CGGTGCATTC AGTGGTATTT GGCGGCTTTG CTGCGCATAA CTTAGCCATT 
CGTATGGATG ATGCTGAAGC AAAAATGGTC ATCACGGTAG ATGCAGGTTT GCGTGGTGGT 
AAAGTCATAA ATTATAAGAG CCTTGTCAAT CAAGGTATTG AGCAGGCGGC TGTTAAGCCT 
GAGCATGTAT TGGTGGTCAA TCGTGGTATT TTGCCATTTG AAGTAAAAGA GCTGGATGTG 
GACTATGCCA CTGAGCGTCG AATCAGCTGT GAAGCCAATG TTATCGTCGA GCCAGTATGG 
CTTGAGTCCA ATACGCCATC GTATCTGCTT TATACTTCTG GTACGACGGG CACACCCAAA 
GGCGTGCAGC GTGATACTGG CGGTCATGCG GTAGCACTGA CTACATCGAT GGATTATATA 
TATGATGGTA AGGCAGGCGA GACGTTTTGG GCGATATCTG ATATCGGTTG GGCAGTTGGG 
CATTCTTATA CCATCTATGC GCCATTGCTC GCTGGCATGA CCAGTATCAT ATATGAAGGC 
TTGCCTCATC AACCCAATCC TGGTATTTGG TGGCGAATTG TGGAAGCCAA CAAGGTCAAT 
ATTTTGTTCA CTGCGCCGAC CGGTGTGCGT ATGCTTAAAA AACAAGATGA GACATGGATG 
ACGCGCTACG ATGTCTCAAG CGTCAAATCG TTCTTTTTGG CAGGTGAGCC ACTAGATGAA 
TCTACTGCCA GTTGGCTGAC CAAGCATTTA GGCGTACCGA TTTTAGACCA CTATTGGCAG 
ACGGAATCGG GTTGGCCTAT TTTGAGTAAT ACGCCCAGAT TTAATGATAA ACCGCATAAA 
CAAGGCTCGC CTGGTTATCC TATGTACGGC TACGATGCAC AGGTTATCAA TGAAGAAACC 
GGCGAGCCGT GTAAAGCGGG TGAAAAAGGT TTGCTTGCGA TTCGCGCACC CTTACCACCG 
GGCTGTTTAA CCACGGTTTG GCGTAATGAT AAGCGCTTTA TTGACAGCTA TTTTAGCTTA 
GCAGATAGCA ATCAATATTC GACGTCAGAC TATGCCGTGG TCGATGAAGA TGGTTATTTT 
CATATTCTTG GTCGTACCGA TGATGTCATC AACGTCGCCG GGCATAGACT GGGCACCCAA 
GAGATTGAAG AGGCGATCAG TAGGCATGCA GAGGTCGCAG AGTGTGCGGT TGTGGGTATT 
CAAGATGAGC TAAAGGGCGA GCTACCGATT GCTTTTTGTG TGCTCAAAGA TTATGAACTG 
GTGGCAACGA CTGAAAATCG TTTCCGCCTT GAGCAGCAAG TGATTGGCGC GGTGGTAAAA 
TCCTTGGGCG GTATTGCAAG GCCTGCAGCG ATCTATTTCC CGCAAGCACT ACCAAAGACG 
CGCTCTGGCA AGATCCTGCG CCGTGCCATT CGGGCATTAG CAGAGAATAA ACCCACTGGT 
GATATGTCTA CCCTTGATAA CCCAACGGCT ATCGATGCGG TCAAGCAATC AATGAAAGAT 
TACTAA 

 

Protein sequence

MSAQTATAVT NQTSTQTFQK PTTTQNFADI YQSSIENKEQ FWAEQAKRIY WHKEPEQILD 
DSNLPFAQWF VGGETNLCYN CVDRHLEERA EQDAFIWLSS EINQELIETY PAVIDAFKDL 
GNNVEFYTDY TKRRLTYNDL YKEVNYFADV LKRHGIEKGD RVIIYMPMIL EAAYAMLACA 
RIGAVHSVVF GGFAAHNLAI RMDDAEAKMV ITVDAGLRGG KVINYKSLVN QGIEQAAVKP 
EHVLVVNRGI LPFEVKELDV DYATERRISC EANVIVEPVW LESNTPSYLL YTSGTTGTPK 
GVQRDTGGHA VALTTSMDYI YDGKAGETFW AISDIGWAVG HSYTIYAPLL AGMTSIIYEG 
LPHQPNPGIW WRIVEANKVN ILFTAPTGVR MLKKQDETWM TRYDVSSVKS FFLAGEPLDE 
STASWLTKHL GVPILDHYWQ TESGWPILSN TPRFNDKPHK QGSPGYPMYG YDAQVINEET 
GEPCKAGEKG LLAIRAPLPP GCLTTVWRND KRFIDSYFSL ADSNQYSTSD YAVVDEDGYF 
HILGRTDDVI NVAGHRLGTQ EIEEAISRHA EVAECAVVGI QDELKGELPI AFCVLKDYEL 
VATTENRFRL EQQVIGAVVK SLGGIARPAA IYFPQALPKT RSGKILRRAI RALAENKPTG 
DMSTLDNPTA IDAVKQSMKD Y