Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0897 |
Symbol | |
ID | 3515137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1072587 |
End bp | 1073732 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637669586 |
Product | MFS drug efflux pump |
Protein accession | YP_264184 |
Protein GI | 71065457 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTG GTCTGATTGG GATGTTTGCT TTTTTGCAGG TATATTCTAT TCAGGCGGTT TTGCCAGTAT TGATGATGGA TTTTTCAGCC ACTGAAGTGC AGGCAGGGAT GATTGTTGGC GCAACAGTGA TGGCGATTGC CATTATGTCA CCATTTTTGG GGATGCTGTC GGATGCTGTC GGGCGCAAAT CCTTTATTGT TGGAGCATTG TTGTTTTTAG CGATACCCAC CGCTTTAATC GCCCAAAGCC CGAGTATAGG CTGGCTTGGC ATGTGGCGCT TTATGCAAGG GTTGTCTGTC CCAGGCATCA CGGTGGTGAC CATTGCCTAT ATCGGTGAGG AGTTTGAGGG GCGGGCTGTT ACAGAGCTTA TGTCATTCTA TGTCTCAGGC TCGGTACTGG GCGGCTTTAT GGGGCGGTTT TTACTGGGGC ATTTGCATGA GTTTATTGGC TGGCGTCATG GCTACTATGT GATGGCAGCC ATGACGCTCA TCGGTGCACT CTGGGTTGGT AAGATGTTGC CATCATCGCA GCATTTTGTG GCCAATCCAA ACTTTCGCTC AGCGATGCAG ACACTTGGTG AGCATCTGAC CAATCGTTAT GTCGTAACGG CATGTTTGCT AGGTTTTTGC GTGCTTTTTT CGCTCGTGGG CTGCTTTACC TTTATTAATC TGCATCTTGC TGGCACGCCT TATGAGCTTA GCACTGGTGC ACTTGCTAAT ATTTTTGCGG TGTATTTAAT CGGAGTGATT ATTACGCCAT TGTCGACCAC ATTATTACGT CGATTTGGAG CAGCACGCAC CGTCCGAGTA GCAGTGATTT TTTCGATGCT CGGGGCGCTA TTAACACTGG TCACTCCATT ATGGGGTATC GTCGTTGGGC TTGCTATTAT GTCGTCAGGC GTCTTTATCA CCCAAGCGGC GACCATCAGT TATATTGCAG TCAATGTCAA AAAAGGTCGC TCATTAGCCT CAGGTTTATA TTACATGGCT TATTATGCGG GCGGCACTAT GGGCGCATGG CTATGCGGCA TCATTTATGC ACGTGGACAA TGGTCACTGA CTGTTTGGCT ATTATTGTTT GTGCAAGTAT TGGCACTTTT GGTGGCAAGT TTTGGCATGA TAAAAACAAA ACCGCGTCCT GCCTAA
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Protein sequence | MTIGLIGMFA FLQVYSIQAV LPVLMMDFSA TEVQAGMIVG ATVMAIAIMS PFLGMLSDAV GRKSFIVGAL LFLAIPTALI AQSPSIGWLG MWRFMQGLSV PGITVVTIAY IGEEFEGRAV TELMSFYVSG SVLGGFMGRF LLGHLHEFIG WRHGYYVMAA MTLIGALWVG KMLPSSQHFV ANPNFRSAMQ TLGEHLTNRY VVTACLLGFC VLFSLVGCFT FINLHLAGTP YELSTGALAN IFAVYLIGVI ITPLSTTLLR RFGAARTVRV AVIFSMLGAL LTLVTPLWGI VVGLAIMSSG VFITQAATIS YIAVNVKKGR SLASGLYYMA YYAGGTMGAW LCGIIYARGQ WSLTVWLLLF VQVLALLVAS FGMIKTKPRP A
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