Gene Psyc_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0897 
Symbol 
ID3515137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1072587 
End bp1073732 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content48% 
IMG OID637669586 
ProductMFS drug efflux pump 
Protein accessionYP_264184 
Protein GI71065457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG GTCTGATTGG GATGTTTGCT TTTTTGCAGG TATATTCTAT TCAGGCGGTT 
TTGCCAGTAT TGATGATGGA TTTTTCAGCC ACTGAAGTGC AGGCAGGGAT GATTGTTGGC
GCAACAGTGA TGGCGATTGC CATTATGTCA CCATTTTTGG GGATGCTGTC GGATGCTGTC
GGGCGCAAAT CCTTTATTGT TGGAGCATTG TTGTTTTTAG CGATACCCAC CGCTTTAATC
GCCCAAAGCC CGAGTATAGG CTGGCTTGGC ATGTGGCGCT TTATGCAAGG GTTGTCTGTC
CCAGGCATCA CGGTGGTGAC CATTGCCTAT ATCGGTGAGG AGTTTGAGGG GCGGGCTGTT
ACAGAGCTTA TGTCATTCTA TGTCTCAGGC TCGGTACTGG GCGGCTTTAT GGGGCGGTTT
TTACTGGGGC ATTTGCATGA GTTTATTGGC TGGCGTCATG GCTACTATGT GATGGCAGCC
ATGACGCTCA TCGGTGCACT CTGGGTTGGT AAGATGTTGC CATCATCGCA GCATTTTGTG
GCCAATCCAA ACTTTCGCTC AGCGATGCAG ACACTTGGTG AGCATCTGAC CAATCGTTAT
GTCGTAACGG CATGTTTGCT AGGTTTTTGC GTGCTTTTTT CGCTCGTGGG CTGCTTTACC
TTTATTAATC TGCATCTTGC TGGCACGCCT TATGAGCTTA GCACTGGTGC ACTTGCTAAT
ATTTTTGCGG TGTATTTAAT CGGAGTGATT ATTACGCCAT TGTCGACCAC ATTATTACGT
CGATTTGGAG CAGCACGCAC CGTCCGAGTA GCAGTGATTT TTTCGATGCT CGGGGCGCTA
TTAACACTGG TCACTCCATT ATGGGGTATC GTCGTTGGGC TTGCTATTAT GTCGTCAGGC
GTCTTTATCA CCCAAGCGGC GACCATCAGT TATATTGCAG TCAATGTCAA AAAAGGTCGC
TCATTAGCCT CAGGTTTATA TTACATGGCT TATTATGCGG GCGGCACTAT GGGCGCATGG
CTATGCGGCA TCATTTATGC ACGTGGACAA TGGTCACTGA CTGTTTGGCT ATTATTGTTT
GTGCAAGTAT TGGCACTTTT GGTGGCAAGT TTTGGCATGA TAAAAACAAA ACCGCGTCCT
GCCTAA
 
Protein sequence
MTIGLIGMFA FLQVYSIQAV LPVLMMDFSA TEVQAGMIVG ATVMAIAIMS PFLGMLSDAV 
GRKSFIVGAL LFLAIPTALI AQSPSIGWLG MWRFMQGLSV PGITVVTIAY IGEEFEGRAV
TELMSFYVSG SVLGGFMGRF LLGHLHEFIG WRHGYYVMAA MTLIGALWVG KMLPSSQHFV
ANPNFRSAMQ TLGEHLTNRY VVTACLLGFC VLFSLVGCFT FINLHLAGTP YELSTGALAN
IFAVYLIGVI ITPLSTTLLR RFGAARTVRV AVIFSMLGAL LTLVTPLWGI VVGLAIMSSG
VFITQAATIS YIAVNVKKGR SLASGLYYMA YYAGGTMGAW LCGIIYARGQ WSLTVWLLLF
VQVLALLVAS FGMIKTKPRP A