Gene Psyc_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0887 
Symbol 
ID3514888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1060690 
End bp1061463 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID637669576 
Productputative NAD(P)/FAD ferrodoxin 
Protein accessionYP_264174 
Protein GI71065447 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000860446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC TCCGCACCGA AACGGTTACA GAGGTTCATC ATTGGAATGA TGCACTATTT 
AGCATCAAAA CCACACGCGA CGACGGCTTA CGTTTTCGTA ATGGTGAGTT TGCGATGATT
GGTTTGGTCG TTGATGGCAA GCCGTTGCTA CGAGCTTACT CGATTGCCAG TCCTAATTAT
GAAGAACATT TGGAGTTTTT CTCCATTAAA GTACAAGACG GTCCATTAAC GTCGCGATTG
CAACACATTA AAGTTGGTGA TGAGCTATTG GTCAGTAAAA AACCAACGGG CACTCTCGTA
TTAGATGATC TATTACCGGG TAAAAACCTC TATATGCTGT CAACCGGTAC AGGTGTTGCG
CCATTTTTAG CATTAGCACG TGACCCTGAA GTCTACGAGC GTTTTGAGAA GGTCATCTTG
GTACATGGTG TGCGCGGTGT TAGTGACTTG GCTTACCGTG ACATGTTCGA AAACGAGCTG
CCGAATGATG AAATTTTTGG TGAAGACTTC CGTAAAAAAT TCATTTATTA TCCGACTGTC
ACTCGCGAAG AATTTAGAAA TACCGGTCGT ATTACCGACT TAATGAAATC TGGCAAATTT
TTTGAAGATA TCGGCCTGCC GCCGATGAAC AAAGAAGATG ATCGCGTTCT AATATGCGGT
AGTATGCCGT TTAATGCTGA AGTCTCAGCT ATTTTGGATG ATTTTGGTCT AACGGTCTCA
CCGCGTATGG GTGTACAGGC AGATTATGCC GTTGAACGCG CCTTTGTTGG TTAA
 
Protein sequence
MSKLRTETVT EVHHWNDALF SIKTTRDDGL RFRNGEFAMI GLVVDGKPLL RAYSIASPNY 
EEHLEFFSIK VQDGPLTSRL QHIKVGDELL VSKKPTGTLV LDDLLPGKNL YMLSTGTGVA
PFLALARDPE VYERFEKVIL VHGVRGVSDL AYRDMFENEL PNDEIFGEDF RKKFIYYPTV
TREEFRNTGR ITDLMKSGKF FEDIGLPPMN KEDDRVLICG SMPFNAEVSA ILDDFGLTVS
PRMGVQADYA VERAFVG