| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0886 |
|---|
| Symbol | |
|---|
| ID | 3514886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1058936 |
|---|
| End bp | 1060300 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637669574 |
|---|
| Product | phage integrase |
|---|
| Protein accession | YP_264173 |
|---|
| Protein GI | 71065446 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00972856 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAA AAGCGATCAG TTCAGACCGA AGTATCAGCA GTCACAAGCC TGAAGATAAG
AAGTACTTCG TTCCTGTCAA AAATCATCCT AAACTTTTTT TAATGGTACG TCCTACTGAG
ACTAAGTCAT GGATGTATCG CTACTACCCG CCTTCAAATC CTAAGCAAAG TATTATCTCT
ATCGGTATAT ATCCAAGTAT CTCATATGCT CGTGCCTGTG AAGTTTGGCG TGAATATGAA
GATCTACTAA GCAAAGGTAT TGATCCCAAA ACTAATCGTG AAGATATAAA GAAAAGTATT
ATTAGTAAAA CTAAAAACTC CTTTAATCAT TTTGCTTGGG AGTACTTTGA AGGCTTAGAG
CAGACTCAAA AAGGTAATAC GTTAATTCGT AAGAAAGGAC GCTTGGAGCT TATATGCTCC
TATATTGGTG ACGAGCCTAT CAGTGAAATT GGCTCACCTA GAATGCTTGA AGTACTACTA
GACATTCAGG CCAACTCATT AAATAAAGCT GGCAAGCCCA CAGATAAGGC TGAACGCTGT
GCAGGTATCG CTAGTGACGT ATTTGTCTAT GCTGGGGCTC GTGGATTCTG TAGCAGCAAT
CCTGCAGCGT TAATTAAAAG CCAATTGGCT AAATCTAGCT ATGGTCATCG TCCAGCCATT
ACCAAGCCCA AAGAGTTTGC TAAACTACTA CGAGCTATTG AAACGATAGA AGGTGACTCG
AACACCATTA ACTCCCTTAG GCTATTGGCT TTGCTTTTTG TGCGTAATGG TGATCTACGC
CGTATGAGAT GGGCTGATGT CGATCTAGAA GCTGGTAGGT GGCAGTTAAA GCCACTGAAG
GGGCAAGGCA AGGTGAACAT GGTCAAAGAT ATGGTGGTTC CCCTACCTCA GCAAGCCGTG
ACTATATTGC GTGAACAGCA AAGGATTAAT GGACATACCG AATATGTCTT TTTTAGCCAG
ACGGCAAAAA AGCATCAGAT TATATCTGAT GCGACTGCTA ATAAGCGTTT AAAGGATTTA
GGCTATAAAG ATATACACTG CGCTCATGGC TTTAGAGCGA CGGCGAAGAC TATCCTACAA
GAGCAGTTAA AGTACTCTCT CATGCTTGTT GAGATGGCAC TGGGCCATAC GACTAAAGAC
CCTAATGGAG CTGCTTACGG GCGGTTTGAG TACATTGACG ATAGAGAAGA GATGATGCAA
AAGTGGGCGG ACTATATAGA CGCTTTGAAG GATGGTAAAG ATACAGCAGC GTTTAGAGCA
GATGCGCAAA CAAAGACTAA TCCCACAGTT CAGCTACAAG CGTTAATTGA TCAGCTGGGA
GAGGATAAAG TGCTTGAGCT GCTTAGTAGC AGGGTCTCAG ATTAA
|
|---|
| Protein sequence | MERKAISSDR SISSHKPEDK KYFVPVKNHP KLFLMVRPTE TKSWMYRYYP PSNPKQSIIS
IGIYPSISYA RACEVWREYE DLLSKGIDPK TNREDIKKSI ISKTKNSFNH FAWEYFEGLE
QTQKGNTLIR KKGRLELICS YIGDEPISEI GSPRMLEVLL DIQANSLNKA GKPTDKAERC
AGIASDVFVY AGARGFCSSN PAALIKSQLA KSSYGHRPAI TKPKEFAKLL RAIETIEGDS
NTINSLRLLA LLFVRNGDLR RMRWADVDLE AGRWQLKPLK GQGKVNMVKD MVVPLPQQAV
TILREQQRIN GHTEYVFFSQ TAKKHQIISD ATANKRLKDL GYKDIHCAHG FRATAKTILQ
EQLKYSLMLV EMALGHTTKD PNGAAYGRFE YIDDREEMMQ KWADYIDALK DGKDTAAFRA
DAQTKTNPTV QLQALIDQLG EDKVLELLSS RVSD
|
|---|
| |