| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0885 |
|---|
| Symbol | |
|---|
| ID | 3514885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1057616 |
|---|
| End bp | 1058830 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637669573 |
|---|
| Product | transposase mutator family protein |
|---|
| Protein accession | YP_264172 |
|---|
| Protein GI | 71065445 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.767788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTC AATCTGACAT TAAAAAACTG GCCGAGCAAA TGGCTAGTAG CATGAACAGC
TTCGATGACA TCAAAGACTT CCAAAAGCAG CTCATGCAAT CCTTTATCGA TACTGCCTTA
GAAGCTGAGA TGGAAGATCA TCTAGGCTAT CCTAAGCATG AGAAGGCAGA CAAGCCTAAT
AAGCGTAATG GGCACACTAA AAAGACAGTC CGTAGCGACA CAGGCGATCT TGAGATCTCC
ACCCCAAGAG ACCGTGACAG CAGCTTTGAA CCTGCATTAG TGCGTAAGCA TCAAACCCGT
GTCAGTGGAC TTGATGACAA AATCATATTC TTTTATGCCA AAGGTCAAAC GACGACTGAG
ATCGTTGATA CCATCAAAGA GCTCTACGAC GTAGATATCT CAAGTAGCTT GGTTTCAAGA
GTCACCGACA ATATATTAGA TGACATCACC GCTTGGCAAA ACCGTCCATT GAGTAGTGTT
TATCCTATCG TCTATTTGGA CTGCATTGTC GTTAAGGTAC GTCAAGACAA GCAGATCATC
AACAAAGCCA TTTATTTAGC CTTAGGCGTT AACCTTAACG GTAAAAAAGA GCTGCTTGGT
ATGTGGCTAT CAGAGAACGA GGGCGCTAAG TTCTGGCTAG GCGTACTCAC TGAACTACAA
AACCGCGGGG TTCAAGATAT CTTGATCGCC TGTGTTGATG GTTTAAAGGG TTTCCCTGAT
GCCATTAACA CCGTCTACCC TAAAGCTCAG GTTCAGCTGT GTATCGTGCA TATGGTGCGG
TATTCAATGA AGTTTGTGCC GTGGATAGAT AAAAAGAATG TGGCGGCTGA TCTAAAAGCC
ATCTATGGCG CTGATACCAT AGAGCTTGCA CAAGCCAACC TTGAGCACTT TGATGAGACT
TGGGGCAAGA ATTACCCACA TGTGGTCAAG TCTTGGCGCA ATAACTGGGA GGGCTTAACG
GTGTTCTTTA ATTATCCTAA AGACATCAGA AAAGCGATTT ATACCACTAA TGCTATTGAG
TCTTTAAACA GTGTTATCCG TACGGCGGTG AATAAGCGTA AGGTATTCCC ATCAGATCAG
GCAGCATTCA AGGTGGTGTA CTTAGCAACC CAGCAGGCAT CCAAAAAGTG GTCGATGCCC
ATTCGTAACT GGACGTCTGC TTTAAATCGC TTTATGATTA TGTTTGATGA CCGTATTAGT
AAGCATTTAA TCTAA
|
|---|
| Protein sequence | MTTQSDIKKL AEQMASSMNS FDDIKDFQKQ LMQSFIDTAL EAEMEDHLGY PKHEKADKPN
KRNGHTKKTV RSDTGDLEIS TPRDRDSSFE PALVRKHQTR VSGLDDKIIF FYAKGQTTTE
IVDTIKELYD VDISSSLVSR VTDNILDDIT AWQNRPLSSV YPIVYLDCIV VKVRQDKQII
NKAIYLALGV NLNGKKELLG MWLSENEGAK FWLGVLTELQ NRGVQDILIA CVDGLKGFPD
AINTVYPKAQ VQLCIVHMVR YSMKFVPWID KKNVAADLKA IYGADTIELA QANLEHFDET
WGKNYPHVVK SWRNNWEGLT VFFNYPKDIR KAIYTTNAIE SLNSVIRTAV NKRKVFPSDQ
AAFKVVYLAT QQASKKWSMP IRNWTSALNR FMIMFDDRIS KHLI
|
|---|
| |