Gene Psyc_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0848 
Symbol 
ID3514348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1016772 
End bp1017596 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content45% 
IMG OID637669535 
Producttransmembrane protein 
Protein accessionYP_264135 
Protein GI71065408 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.57519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTAA TAATTTTCTT AATAATAGGG GCTCTAGCAG GATTTGCTGC TGGGCTCTTC 
GGTGTGGGCG GTGGAACGAT TATCGTACCG CTGCTATTTA TCGTCTTTAC CCGAATGGAT
TACAGTCCTG ATAGCATCAT GCATTTGGCT TTAGGTACGT CACTGGCGAC CATTATTGTC
ACGTCTATAA GCTCGTTGAT GGCACACAAT AAAAAGGGTG CAGTCATGTG GCCTGTTTTT
AAAAACCTAG CACCAGGCTT AGCGGTTGGC TGTTTTTTAG GGGCAGGGAT CGCAGGACAG
ATATCTGGGC TGTATCTTCA GCTTATTGTT GGTGTGTTTT TGCTTTGGCT CGGCTATAAG
ATGTTTACTG ATGGCAAAAA GAGGCTAGAT AGTAATATTA ATAGTGCCAG CAATGGCAAT
GCAGTATTGC CTTCAAAGTC TAAGCAATTA GCGGCAGGCG GGGTTATAGG TGTGGCTTCT
GCCATTTTGG GTATCGGCGG CGGCAGCTTA ACGGTACCTT ACCTCACGCG TTATGGTGTG
GTCATGCAAA AAGCGGTTGG CACGTCAGCG GCATGTGGTC TGCCTATCGC CATTGCCGGT
GCGTTAGGGT TTATGGTTTT TGGGATGCAG CAAGAAGTCA ATGTTCCCAA TACGATTGGC
TTTGTGCACA TTTATGCCTT TTTAGGGATT AGCATCATGA GTTTTTTCAC CGCTAAGCTA
GGTGCGAAAG TCGCTCATAT GTTATCACCA CAGCTCTTAA AAAAATGTTT TGCGGTATTA
TTAACCGTCG TGGGATGTTA CTTCCTTTTT AAAGGGCTGC TTTAA
 
Protein sequence
MELIIFLIIG ALAGFAAGLF GVGGGTIIVP LLFIVFTRMD YSPDSIMHLA LGTSLATIIV 
TSISSLMAHN KKGAVMWPVF KNLAPGLAVG CFLGAGIAGQ ISGLYLQLIV GVFLLWLGYK
MFTDGKKRLD SNINSASNGN AVLPSKSKQL AAGGVIGVAS AILGIGGGSL TVPYLTRYGV
VMQKAVGTSA ACGLPIAIAG ALGFMVFGMQ QEVNVPNTIG FVHIYAFLGI SIMSFFTAKL
GAKVAHMLSP QLLKKCFAVL LTVVGCYFLF KGLL