| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0823 |
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| Symbol | clpB |
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| ID | 3514323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 988604 |
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| End bp | 991201 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669510 |
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| Product | putative chaperonin clpA/B |
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| Protein accession | YP_264110 |
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| Protein GI | 71065383 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00549001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGATTTG AAAAGTTTAC TCAAAAACTG CAATCTGCGA TACAAGAGGC ACAAAGTCTG
GCGTTAGGGC GTGACCATAC CGGTATTGAT CCGGTGCACC TGCTTGCAGT CTTGCTGCAA
GATGAGTCTA ACTTGTCTAT CTGCCAACAA GCAGGCGCGT CTATTCCTGC GTTAAAAAAT
GGCGTGGCAA AGGCATTAGA TAACCAAGCA ACGATTTCGG AGCCGACAGG TGATGTCAAT
CTTAATCCAA ACTCGGTTAA GATTTTGAAT TTGGCAGATC GCCAAGCGCA AAAAGAAGGC
GATGATTTTA TCGCGACTGA ATGGGTGATG TTGGCACTTG CTGAGCAAGG CGATACCAAA
AAAATATTTG AAAGTGCTGG CGTTACAGCC AATAAATTAA AAGCGGTGAT TGAGCAATTG
CGCGGCGATG ATACTGTGAA TAATCAAAAT GCAGAAGATC AGCGTGATGC CCTTAATAAA
TACACCATTA ACTTAACTGA GCAAGCAGAG CTTGGTAAGC TTGATCCGGT GATTGGTCGT
GACGAAGAGA TTCGACGTAC TATCCAAGTG TTGTCACGCC GTACCAAAAA CAATCCTGTG
CTCATCGGTG AGCCAGGTGT TGGTAAAACG GCTATTGTAG AAGGCTTGGC ACAAAAAATC
ATCAATGGTG ATGTACCAGA AGGTTTACGT CGTAAAGAAG TGCTGTCGTT GGACTTAGGT
GCTTTGATTG CTGGTGCAAA ATTCCGTGGT GAGTTTGAAG AGCGTCTCAA AGCGGTACTC
AGTGACTTAT CGAAGCAAGA AGGTAACGTT ATCTTATTTA TCGATGAGCT ACATACGCTA
GTTGGGGCAG GTAAGGCGGA TGGTGCGATG GACGCCGGTA ATATGCTAAA ACCAGCGCTT
GCACGTGGTG AGCTGCATTG CGTCGGTGCG ACTACTTTAG ATGAATATCG TAAGTATATT
GAAAAAGATG CGGCGCTTGA GCGTCGTTTC CAAAAAGTAT TGGTTGATGA GCCGACGGTT
GAAGATACCA TTGCGATTTT ACGTGGACTA AAAGAGCGTT ATGAGCTGCA TCATGGGGTC
GATATCCAAG ACAGCGCCAT CATTGCGGCT GCTCGTATGA GTCATCGTTA TATCACTGAT
CGCAAGCTGC CGGATAAAGC CATTGACTTG ATTGATGAAG CTGCGAGTCG CTTACGTATG
GAGATGGACA GCAAACCTGA GTCACTAGGT AAGCTCGATA GTCGTTTGAT ACAGCTAAAA
ATGCAGCGTG AAGTGCTCAA AAATGAAGAA GACGCGGGCG CGCAAGCAGA GCGTAAAGTG
CTTGATGCAC AAATTGAAGA GCTGGAAAAA GAGTACGCCG ATCTTAACGA GATTTGGCAA
GCAGAAAAAG CTTTGGTTAA AGGCAGTCAG CAGTTAAAAG ACGAGCTGGA CAAAGCCCGT
ATTGCTTATG ATAAAGCCAG CCGCGAAGGC GATTATGAGA CCATGAGCAA GCTGCAGTAT
GAGACGATAC CGCAGTTAGA GCGCCGTATC CATGAATCTG ATTTGGCAGA GCAAAAAGAG
CAGACTGGTG AAAATAGTGG TGTAAAACTG CTGCGTAACA AAGTCACGGA CAATGAAATC
GCCGAAGTCG TTGCTGCAGC GACGGGTATT CCAGTTAGTA AAATGCTGCA AGGCGAACGT
GACAAGATGC TGGCGATGGA AGAAAACCTC CATGAGCGCG TCATCGGTCA AGATGAAGCG
GTCGAAGCAG TAGCCAATGC AGTACGCCGT AGCCGTGCTG GCTTGTCTGA TCCAAACCGT
CCTTCAGGCT CGTTCTTGTT TTTAGGGCCT ACGGGTGTCG GTAAAACAGA GCTGACCAAA
TCGTTGGCGA ACTTCTTGTT TGATTCAGAA GATGCTATCG TCCGTATCGA TATGAGTGAG
TACATGGAGA AGCATAGCGT CAGCCGTTTG GTGGGCGCGC CTCCAGGTTA TGTGGGCTAT
GAAGAAGGTG GTGCTTTGAC GGAGGCGGTA CGCCGTAAGC CTTATAGTGT GATTTTGTTT
GATGAAGTTG AAAAAGCGCA TCCTGATGTG TTTAATATCT TGCTACAAGT ATTGGACGAT
GGTCGCTTGA CGGATTCACA AGGTCGCGTG GTAGACTTCA AAAACACCGT CATTATTATG
ACCAGTAACT TGGGTTCGCA CAAAATCCAA GAAATGGTTG GCGAGAGCTA TGAAGATATC
AAAGCTGAGG TGATGGATTC GGTTGGACAG CATTTCCGCC CAGAGTTTGT CAACCGTATC
GATGAGATCG TGGTATTCCA TCCGCTAGGT ATGTCACAGA TGGCTGGTAT TGCTGCGATT
CAGTTGAACC GCTTGCGTCA GCGTCTATAT GAGCGTGAGT TGGATATCGA GTTATCGGCA
GATGCGATGA ACAAACTGGT TGCAGTTGGC TATGATCCTG TTTATGGTGC GCGTCCACTT
AAACGTGCGA TCCAACAAGA GATTGAAAAC CCATTATCAT TGAAATTGCT GGCAGGTGAT
TTTGTCGCTG GTGATATCAT CAAAGTCGAT GTCGGTGCTG ATGACAAACT GACCTTTGAT
AAGCTTAGAA TGAGCTAA
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| Protein sequence | MRFEKFTQKL QSAIQEAQSL ALGRDHTGID PVHLLAVLLQ DESNLSICQQ AGASIPALKN
GVAKALDNQA TISEPTGDVN LNPNSVKILN LADRQAQKEG DDFIATEWVM LALAEQGDTK
KIFESAGVTA NKLKAVIEQL RGDDTVNNQN AEDQRDALNK YTINLTEQAE LGKLDPVIGR
DEEIRRTIQV LSRRTKNNPV LIGEPGVGKT AIVEGLAQKI INGDVPEGLR RKEVLSLDLG
ALIAGAKFRG EFEERLKAVL SDLSKQEGNV ILFIDELHTL VGAGKADGAM DAGNMLKPAL
ARGELHCVGA TTLDEYRKYI EKDAALERRF QKVLVDEPTV EDTIAILRGL KERYELHHGV
DIQDSAIIAA ARMSHRYITD RKLPDKAIDL IDEAASRLRM EMDSKPESLG KLDSRLIQLK
MQREVLKNEE DAGAQAERKV LDAQIEELEK EYADLNEIWQ AEKALVKGSQ QLKDELDKAR
IAYDKASREG DYETMSKLQY ETIPQLERRI HESDLAEQKE QTGENSGVKL LRNKVTDNEI
AEVVAAATGI PVSKMLQGER DKMLAMEENL HERVIGQDEA VEAVANAVRR SRAGLSDPNR
PSGSFLFLGP TGVGKTELTK SLANFLFDSE DAIVRIDMSE YMEKHSVSRL VGAPPGYVGY
EEGGALTEAV RRKPYSVILF DEVEKAHPDV FNILLQVLDD GRLTDSQGRV VDFKNTVIIM
TSNLGSHKIQ EMVGESYEDI KAEVMDSVGQ HFRPEFVNRI DEIVVFHPLG MSQMAGIAAI
QLNRLRQRLY ERELDIELSA DAMNKLVAVG YDPVYGARPL KRAIQQEIEN PLSLKLLAGD
FVAGDIIKVD VGADDKLTFD KLRMS
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