Gene Psyc_0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0810 
Symbol 
ID3514658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp970850 
End bp972292 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content45% 
IMG OID637669497 
Productamino acid transporter 
Protein accessionYP_264097 
Protein GI71065370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.286981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT TAAAAAAATC GTTAGGGACG CTGGATGTTA TCGCTTTAGC GTTTGGCGCT 
ATGGTAGGTT GGGGCTGGGT CGTCTTGGCT GGTGGTTGGA TTTTATCCGC TGGTACTTGG
GGTGCGATGC TAGCATTCTT TATAGGCGGT TTGGCAGTGA TACTGATTGG TGTGACTTAT
GCTGAGCTTG CTGCATCAAT GCCAATCACT GGTGGTGAGC ATACGTATAC GCATCGCGCG
CTAGGAGTAA ACGTCTCCTT TATCTGCTCA TGGAGTATTT TATTTGGTTA TTTCTCCGTG
GTCGCTTTTG AGGCAGTCGC ATTACCGACA GTCGTAGAGT ATTTTATTCC CAATTATAAT
CAAGGGTATC TCTGGACCAT CGCTGGGTGG GATGTCTACG CTACATGGGT CGGGGTTGGG
ATGCTAGGTT CCGTCATTGT AACATGGCTA AATATCCGCG GTATGGAAGT CAGCGCATGG
TTCCAAAAAA CCGCAGTACT GGGTATTCTA TTCGTCGGGA CTTTGCTATT TATTGGTGCA
GTACTTTATA ACCCTGACAC CTCTACAGCA ATACAATCGC CAGCCTTCAT TGGTGGTGTC
GGTGGCATGA TGGCCGTTAT TGTCATGGTG CCCTTTATGT TCGTGGGTTT TGACGTTATT
CCACAAGCGG CAGAAGAGAT TGATTTAACT CGTCCTAATA TTGGTAAGTT TTTGATTATC
TCTATCGTCG TTGCGGTGAT GTGGTATGTG GGTATTGCTT GGAGTGTTGG GACGACTTTG
CCGCTTGTAC AAGCAGAGAG CTCGACCTTA GCCACTGCTG ATGCCATGAC CAATGCTTGG
CAAGGCAAAT GGGCGGGTAT TCTGTTGGTT ATCGGCGGTG TACTGGGTAT TTTATCAAGC
TGGAATGCGT TCTTAATTGG TGGTAGTCGT CTGCTGTATG CGATGTCCAA AGCGCGTATG
TTGCCAGCCT TTTTAGGTAA GTTACATCCA AAATATAAAA CCCCTTCAAA TGCGATTTTA
TTGATTGGTG GTTTAGCGAC GCTAGCACCA TTGTTTGGTC GTAAAATGTT GGTTTGGATC
GTTGATGCCG GTGGTTTTGG TATCGTTATT GCTTATACCT GTGTCGCTAT TTCATTCTTA
GTACTACGCT ACCGTGAGCC TGATATGGTA CGTCCATTTA AGATACCAGC AGGTAAGCTT
GTCGGTATGG TAACGATTGT ACTTAGTGTT GGTTTATTAA TGTTATATAT GCCAGGTATG
CCATCAGCAC TGACTGCCGT CGAATGGTGG ATTTTCTTTG GTTGGACCAT GTTAGGTATC
GTGTTATACG GTTATGCAAG GGTGAAATAT CCAGGCATTA GTGAATCGAT TATGGCAGAA
GAGCTACGTG AATTAAAGAT TGTCAATCAG CTGTGGTTAA AGGATAATTC AACTAAGAAG
TAA
 
Protein sequence
MSELKKSLGT LDVIALAFGA MVGWGWVVLA GGWILSAGTW GAMLAFFIGG LAVILIGVTY 
AELAASMPIT GGEHTYTHRA LGVNVSFICS WSILFGYFSV VAFEAVALPT VVEYFIPNYN
QGYLWTIAGW DVYATWVGVG MLGSVIVTWL NIRGMEVSAW FQKTAVLGIL FVGTLLFIGA
VLYNPDTSTA IQSPAFIGGV GGMMAVIVMV PFMFVGFDVI PQAAEEIDLT RPNIGKFLII
SIVVAVMWYV GIAWSVGTTL PLVQAESSTL ATADAMTNAW QGKWAGILLV IGGVLGILSS
WNAFLIGGSR LLYAMSKARM LPAFLGKLHP KYKTPSNAIL LIGGLATLAP LFGRKMLVWI
VDAGGFGIVI AYTCVAISFL VLRYREPDMV RPFKIPAGKL VGMVTIVLSV GLLMLYMPGM
PSALTAVEWW IFFGWTMLGI VLYGYARVKY PGISESIMAE ELRELKIVNQ LWLKDNSTKK