Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0810 |
Symbol | |
ID | 3514658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 970850 |
End bp | 972292 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669497 |
Product | amino acid transporter |
Protein accession | YP_264097 |
Protein GI | 71065370 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.286981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAT TAAAAAAATC GTTAGGGACG CTGGATGTTA TCGCTTTAGC GTTTGGCGCT ATGGTAGGTT GGGGCTGGGT CGTCTTGGCT GGTGGTTGGA TTTTATCCGC TGGTACTTGG GGTGCGATGC TAGCATTCTT TATAGGCGGT TTGGCAGTGA TACTGATTGG TGTGACTTAT GCTGAGCTTG CTGCATCAAT GCCAATCACT GGTGGTGAGC ATACGTATAC GCATCGCGCG CTAGGAGTAA ACGTCTCCTT TATCTGCTCA TGGAGTATTT TATTTGGTTA TTTCTCCGTG GTCGCTTTTG AGGCAGTCGC ATTACCGACA GTCGTAGAGT ATTTTATTCC CAATTATAAT CAAGGGTATC TCTGGACCAT CGCTGGGTGG GATGTCTACG CTACATGGGT CGGGGTTGGG ATGCTAGGTT CCGTCATTGT AACATGGCTA AATATCCGCG GTATGGAAGT CAGCGCATGG TTCCAAAAAA CCGCAGTACT GGGTATTCTA TTCGTCGGGA CTTTGCTATT TATTGGTGCA GTACTTTATA ACCCTGACAC CTCTACAGCA ATACAATCGC CAGCCTTCAT TGGTGGTGTC GGTGGCATGA TGGCCGTTAT TGTCATGGTG CCCTTTATGT TCGTGGGTTT TGACGTTATT CCACAAGCGG CAGAAGAGAT TGATTTAACT CGTCCTAATA TTGGTAAGTT TTTGATTATC TCTATCGTCG TTGCGGTGAT GTGGTATGTG GGTATTGCTT GGAGTGTTGG GACGACTTTG CCGCTTGTAC AAGCAGAGAG CTCGACCTTA GCCACTGCTG ATGCCATGAC CAATGCTTGG CAAGGCAAAT GGGCGGGTAT TCTGTTGGTT ATCGGCGGTG TACTGGGTAT TTTATCAAGC TGGAATGCGT TCTTAATTGG TGGTAGTCGT CTGCTGTATG CGATGTCCAA AGCGCGTATG TTGCCAGCCT TTTTAGGTAA GTTACATCCA AAATATAAAA CCCCTTCAAA TGCGATTTTA TTGATTGGTG GTTTAGCGAC GCTAGCACCA TTGTTTGGTC GTAAAATGTT GGTTTGGATC GTTGATGCCG GTGGTTTTGG TATCGTTATT GCTTATACCT GTGTCGCTAT TTCATTCTTA GTACTACGCT ACCGTGAGCC TGATATGGTA CGTCCATTTA AGATACCAGC AGGTAAGCTT GTCGGTATGG TAACGATTGT ACTTAGTGTT GGTTTATTAA TGTTATATAT GCCAGGTATG CCATCAGCAC TGACTGCCGT CGAATGGTGG ATTTTCTTTG GTTGGACCAT GTTAGGTATC GTGTTATACG GTTATGCAAG GGTGAAATAT CCAGGCATTA GTGAATCGAT TATGGCAGAA GAGCTACGTG AATTAAAGAT TGTCAATCAG CTGTGGTTAA AGGATAATTC AACTAAGAAG TAA
|
Protein sequence | MSELKKSLGT LDVIALAFGA MVGWGWVVLA GGWILSAGTW GAMLAFFIGG LAVILIGVTY AELAASMPIT GGEHTYTHRA LGVNVSFICS WSILFGYFSV VAFEAVALPT VVEYFIPNYN QGYLWTIAGW DVYATWVGVG MLGSVIVTWL NIRGMEVSAW FQKTAVLGIL FVGTLLFIGA VLYNPDTSTA IQSPAFIGGV GGMMAVIVMV PFMFVGFDVI PQAAEEIDLT RPNIGKFLII SIVVAVMWYV GIAWSVGTTL PLVQAESSTL ATADAMTNAW QGKWAGILLV IGGVLGILSS WNAFLIGGSR LLYAMSKARM LPAFLGKLHP KYKTPSNAIL LIGGLATLAP LFGRKMLVWI VDAGGFGIVI AYTCVAISFL VLRYREPDMV RPFKIPAGKL VGMVTIVLSV GLLMLYMPGM PSALTAVEWW IFFGWTMLGI VLYGYARVKY PGISESIMAE ELRELKIVNQ LWLKDNSTKK
|
| |