| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0805 |
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| Symbol | gcdH |
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| ID | 3514653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 963619 |
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| End bp | 964803 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669492 |
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| Product | putative glutaryl-CoA dehydrogenase |
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| Protein accession | YP_264092 |
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| Protein GI | 71065365 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.75963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.310028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTT CTAGCAGCCC ACGTTTTGAT TGGGAAGATC CATTTTTATT ACGTGACCAG
CTTACAGATG AAGAGCGCAT GGTAACGGAC AGTGCGCGTC AGTTTTTTCA AAAAGAGCTA
ATGCCTGGCA TCATTCAGGC CAACCGCAAT GAGCACTTCG ATCGCAATAT TATGCGTCAG
ATGGGCGAGA TGGGTCTTCT TGGTGTGACG ATAGACGGTT ATGGTTGTGC TGGCATGTCG
AGCGTGGCTT ATGGCTTGAT TGCTAAAGAA GTTGAAGCGG TGGATTCAGG TTATCGTTCG
GCGATGAGCG TGCAGTCAAG CTTGGTGATG CATCCGATAC ATGCCTATGG TACAGAAGAG
CAAAAAGAAA AATATCTGCC GAAGCTGGCG ACTGGCGAAT ATGTCGGCTG TTTTGGTTTG
ACAGAGCCAG ATTCGGGTTC AGATCCCTCA TCAATGTTAA CGCGTGCACG CGCAGTGGCA
GGTGGTTATG AGCTGACTGG TAATAAAATG TGGATTACCA ATAGTCCGAT TTCTGATGTG
TTTGTCGTTT GGGCAAAAGA TGATGCCGGC GATATTCGTG GCTTTATCTT AGATAAAGGT
ATGAAAGGAC TGTCCGCACC GAAAATCGAA GGCAAGTTCT CATTGCGTGC GTCTGTCACG
GGTGAGATTG TCATGGACAA AGTGTTTGTC CCTGAAGCCA ATGCTTTCCC AGATATTCGT
GGTCTAAAAG GTCCATTTGG TTGCTTAAAC AAAGCCCGTT ACGGTATCGC TTGGGGTTCA
ATGGGCGCCG CTGAATTCTG CTGGAAAGCA TCACGTCAGT ACACCCTTGA CCGTAAACAA
TTTGGCCGTC CGCTAGCGGC AACGCAGTTG GTACAGCTAA AGCTTGCCAA TATGCAAACG
GAAATCACAC TAGGTCTGCA AGCTGCATTG CGTGTTGGTC GTTTGATGGA TGAGGATAAC
GCCGCTCCTG AAATGATCTC ACTAATTAAG CGTAATAACT GTGGTAAAGC ACTAGAGATT
GCACGTATTG CACGTGATAT GCATGGCGGT AATGGTATCT CTGATGAGTT CCATATCATT
CGTCATGTTA TGAATTTAGA AGCGGTCAAT ACTTATGAGG GCACACATGA TATTCATGCC
CTTATTCTAG GTCGCGCGCA GACTGGTATT CAGGCATTTT ATTAA
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| Protein sequence | MATSSSPRFD WEDPFLLRDQ LTDEERMVTD SARQFFQKEL MPGIIQANRN EHFDRNIMRQ
MGEMGLLGVT IDGYGCAGMS SVAYGLIAKE VEAVDSGYRS AMSVQSSLVM HPIHAYGTEE
QKEKYLPKLA TGEYVGCFGL TEPDSGSDPS SMLTRARAVA GGYELTGNKM WITNSPISDV
FVVWAKDDAG DIRGFILDKG MKGLSAPKIE GKFSLRASVT GEIVMDKVFV PEANAFPDIR
GLKGPFGCLN KARYGIAWGS MGAAEFCWKA SRQYTLDRKQ FGRPLAATQL VQLKLANMQT
EITLGLQAAL RVGRLMDEDN AAPEMISLIK RNNCGKALEI ARIARDMHGG NGISDEFHII
RHVMNLEAVN TYEGTHDIHA LILGRAQTGI QAFY
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