| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0789 |
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| Symbol | |
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| ID | 3514637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 942973 |
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| End bp | 943944 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669476 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_264076 |
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| Protein GI | 71065349 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.683561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGATA TGACCAACAA ACGTCTTTCG GTTGCCCCTA TGATCGATTG GACAACAACA
GATTATCGTT ATTTTGCCCG TCTTTTTAAT CCACATGTCT ATTTGTATAC CGAGATGATT
AGTACAGGCG CGCTGATACA TGGCAATCGC GCACGGCATC TGCGCTTTGA TGCCCTTGAG
CACCCGCTGG TACTGCAACT TGGCGGTGCA GATATGACTG AGATGACGCA GTGTGCAGAA
TTCGCCCAGC AGCATGGTTA TGATGAGGTC AATATTAATG TGGGCTGCCC CTCCGATCGT
GTACAGCACA ATAAAATCGG TGCCTGCCTG ATGGCTGAAC CCAATACCGT TGCAGATTTG
GTCAAGCATA TGCAAGCGGC TGTCGATATC CCAGTAACGG TCAAGCATCG TATCGGCATT
GATGACTTTG ACAGTTATGA ATTTATGGCG GATTTTGTAC AGAAGGTAGC AGCTGGTGGT
TGTACGCGCT TTATCGTCCA TGCTCGTACA GCATGGCTAC AAGGCTTGAG TCCAAAGCAA
AATCGTGAGA TACCACCACT GCGTTATGAA GATGTGTATC GTTTAAAACA AGATTTTCCT
GCACTTGATA TTGAGATTAA TGGTGGGATT GAGACCGTCG CTGATATTGA GGCACACCTT
GAGCATATCG ATGGGGTTAT GATAGGACGT GCCTTTTATC ATAACCCGTA TCTGCTAGCC
GAAGCCAATA GCCTGTGGGG CACCCCTGTC CCGAAGCGTT CAGATATTTT GGCGCAGCTG
TATCCTTATC TAGAAGAGCA AATCGCTAAA GGTGAAGCAC TTCCAACGAT GACTCGGCAT
TATTTAGGGT TATTCCAAGG ATTGGTGGGT GCACGAAAAT GGCGTCAAGC GTTGAGTGGC
AAGCCTCATT TGACGATAGA TGATATCAAA TATGCAGCGA CTGAAGTATT AGCCCTTAAC
CCTGACGCCT GA
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| Protein sequence | MVDMTNKRLS VAPMIDWTTT DYRYFARLFN PHVYLYTEMI STGALIHGNR ARHLRFDALE
HPLVLQLGGA DMTEMTQCAE FAQQHGYDEV NINVGCPSDR VQHNKIGACL MAEPNTVADL
VKHMQAAVDI PVTVKHRIGI DDFDSYEFMA DFVQKVAAGG CTRFIVHART AWLQGLSPKQ
NREIPPLRYE DVYRLKQDFP ALDIEINGGI ETVADIEAHL EHIDGVMIGR AFYHNPYLLA
EANSLWGTPV PKRSDILAQL YPYLEEQIAK GEALPTMTRH YLGLFQGLVG ARKWRQALSG
KPHLTIDDIK YAATEVLALN PDA
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