Gene Psyc_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0767 
Symbol 
ID3514267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp917799 
End bp919004 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content45% 
IMG OID637669454 
Productsmall-conductance mechanosensitive ion channel 
Protein accessionYP_264054 
Protein GI71065327 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.967765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.366005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA TAATGGCAAT CACTAGTATT ACTGAGTTTT TTCAAGAGAT TGCTCGCGAT 
CTGCATACCA GCCTTTATCT TGCCATTGGT GGCTCTATCG AGGAAGGCAC CTTAGATTGG
TCGTCTAAAT CAGTAGAACT GGTGAGCACT GGCATCAAAA TCCTAATATT GCTTGCGATA
TCGGGGTTTC TTTATTGGCT TGCTATCTAT GTACTCAAAA AAAGCAAAGC ACGCATTCGC
CTTAATGAGC GCTGGGCTAA AATTGCCCGC TCAATCCTGC GTTATGTATG GGCCGTGACC
AGTGTCATTG CTATTATGAG TCAGCTGAAT TTTGAGCCAG ATACCATCAA GGCCACTGCC
AAAGCCAGTA CATGGGCGGG GATATATTAT GTATTATGGA CATCTTCTGG ACAAATTATC
CATAAAATCC TACAGCACTA TGGTCTAAAC GCCTCTATTG AGCAGCTGCT TAAAAATATC
TTATCGGTGC TGCTATTAGT CTTAGGGCTT GCCAGTGTCA TGGCACAGTT TGGCTTTGAT
ATTGTCTCTT TAGTAGCAGG TTTGGGTATC GCCGGTTTGG CAGTCGGTTT TGCCGCGCAG
TCAACGCTTG CCAATTTTAT TGCGGGCATT ACTATTTTGC TTGAGCAGTC CTTTCAAGTC
GGTGACTGGG TCAACATCAA TGACAATGAA GGTCGCGTAG TGGTGATTGC CTTACGTACG
ACCCATATCT TAACTCGTGA CAATATTACA GTCATCATAC CCAATTCGAA TGTCGCCTCC
TCCGTCGTTA CCAACCTGAC CTCCAAAAAC TTTATACGCT TTGATATTCA GATGCGTATT
GCTTTTGAAG ATGATATCGA TAAAGCACGT GAGGAAATTC TGCAGGTACT GTCTGATAGT
GAGGCGGTAC TTAACCGACC TGAGTCTTCT GCGACCGTGG CAGAGATTGG CGAGTATGGC
GTATATTTTA TTGTACGCTT TTGGGTCAAA CCAGCGGCAG TAGCTCGTAT GCCCAAAATC
AAAGAGGATT TACGAGAGAA TATCAAACGC GCTTTTGATG CCGCTGATAT CTCGACCCCT
TATCCTCATA TGCGCCTCTT AATGCCAAGA GAAGACGTCT ATCCGATTGT GACCAAGCCC
AAGCCATTGG CAACGACCGC GCAAACTGTT TCAGAGTCAT TAGCGCTGAA CAAAGACCAG
CATTAA
 
Protein sequence
MDKIMAITSI TEFFQEIARD LHTSLYLAIG GSIEEGTLDW SSKSVELVST GIKILILLAI 
SGFLYWLAIY VLKKSKARIR LNERWAKIAR SILRYVWAVT SVIAIMSQLN FEPDTIKATA
KASTWAGIYY VLWTSSGQII HKILQHYGLN ASIEQLLKNI LSVLLLVLGL ASVMAQFGFD
IVSLVAGLGI AGLAVGFAAQ STLANFIAGI TILLEQSFQV GDWVNINDNE GRVVVIALRT
THILTRDNIT VIIPNSNVAS SVVTNLTSKN FIRFDIQMRI AFEDDIDKAR EEILQVLSDS
EAVLNRPESS ATVAEIGEYG VYFIVRFWVK PAAVARMPKI KEDLRENIKR AFDAADISTP
YPHMRLLMPR EDVYPIVTKP KPLATTAQTV SESLALNKDQ H