| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0748 |
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| Symbol | |
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| ID | 3514248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 892567 |
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| End bp | 894651 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669436 |
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| Product | TRAP-T family transporter fused inner membrane subunits |
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| Protein accession | YP_264036 |
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| Protein GI | 71065309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.546913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.914898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTC AAGTGACGGA TCACAATAGC GCATCCACCA TGTCTAGCGA AGATGCCAAT
TTGTCGAAGC ATCCGGACCT TCATGTAGAT ACTGATGTTG ACGATGACGA TGATGTTGAT
CCTAGTGTCA CACAGGCGAT ATTAGAAAAA TACGATCGAG AATCTATTAC GCGTCATATC
ACCCAAGGTC CAGTGAAGTA TATTATTGCT GCGATCTGTA TTTTCTACTC CATTTTTCAC
TTATACATCA CCTTTAATCC AATGCCCTCA CTACTACAGC GCTCTGTGCA TGTGGGCGTT
GGGTTTGCTT TGATTTTTTT GATTTTCCCT GCCAGTAAAA AAAGCAGCCG TAAGAAAGTG
GCATGGTATG ACTGGATTTG GTTTTTACTG TCCTTCTCTG GGATGGCCTA TCTCATATAT
GAGTACCAAG AAATTGTGAC TTCTCGCGGT GGTATGGCAA ATTCGGTCGA TGTGATATTT
TCTATTATTA CGGTCATCTG TGTCCTTGAA GGTAGTCGAC GCATCACTGG TTGGATATTG
CCCATATTGG CGTCGATATT TTTGCTCTAT CCATTTATAA GTCATTTAGA CTTTATGCCA
AATCGTTTGC TCACTCGGCC ATATGATTTT GGCGATATTT TTGGTCAGCT ATTTTTGAAG
ACTGAAGGAC TGTACTCCGT TGCGATTGGC GCGTCAGTGA CTTTTATCTT TCTGTTTATT
TTGTTTGGCG CATTTTTGGC GCGTTCTGGA ATGGGTCAGC TATTTAATGA TTTGGCATTG
GCGCTGGCAG GGGATAAAAA AGGCGGACCT GCTAAGGTTG CTGTGATTTC AAGCGGCTTT
ATGGGCAGTA TCAATGGCTC AGCCTTATCA AACGTAGTCA GTACCGGCGC GTTTACCATC
CCTTTGATGA AAAAGGTCGG TTATCATAAA GATTTTGCTG GGGCAGTAGA GGCCAGTGCC
TCAGTCGGTG GTCAGATATT ACCGCCTATC ATGGGTGCCA GTGCTTTTAT TATGGCGGAG
ACAACAGGCC TACCGTATAG CACCATTGCT TTGGCGGCGT TATTACCTGC TATTCTCTAT
TATCTCGGCG TTATCGCACA GGTACATTTT CGTGCCGGTC GCCGAGACTT AAAAGGCATG
GCAAAAGAGA GTCTGCCGCA GGTAAAAGAG GTATTAAAAG CGCGCGGTCA TATGCTATTG
CCGATTGTGT TTTTGATATA TTTATTAATA CAAAATGTAC CAGTAGGTTA TGCCGCTGCT
TATACCATTG GCTTTACTGT CGTCATCAGT ATGCTACGCA AAGAGACACG CATGGGCTTC
AAGGATATCT TGGGTGCTCT AGAAGATGGT GCTCGCCAGT CATTAGCAGT GATGGCAGCT
TGTGCGGTCG TGGGTATTAT CATCGGAGTA GTCAGTTTGA CCAGCTTTGG TACGGTGATG
ACTTCTTCAA TTGTCACCTT GGGTGCAGGG TCTTTATTGC TTACTTTGAT TTTGACTATG
CTAGCTTCGA TGGTCTTGGG TATGGGATTG CCCTCCATTC CTGCTTATAT CATTACCGCA
ACCATGGCAG CGCCAGCTTT AGCTGGGTTT GATATTCCTA TTTTATCAGC GCATATGTTT
GTCTTCTATT TTGGCGTGTT TGCTAACATT ACCCCGCCAG TCTGTCTAGC AGCCTTTGCT
GGTGCTGGTA TCTCTGGCGG TGACCCGATG ACAACAGGAT ACTTGTCATT AAAGTTAGCG
TTAGCAGGTT TTATCGTCCC GTTTATGTTT ATTTATAATC CTGCGATGTT GATGATTGAC
CCGACAGATC TTGCTGTCAC GGCTAAAGCG TTTCCTCTGC CACCTGTAAT CGATATTGTT
ATTGCTGTTG TGACGTCTGT CATTGGTGTG ATTGGGCTTA GCGCGGCGTT AGAGGGTTAT
TTTAAAAGTG ACATGAATGT CGTTACACGC TTAATATTGG CATTAGGTGC ATTATTGCTG
ATTTATCCTG GGCTTATCAC AGGTGTAATA GGTGGCGTAA TAGTACTGGG TATCGCGGCG
TTTAATATAA AAGGTAGTAA GGCGCCAACC GCTTTAAGTG TTTAA
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| Protein sequence | MNSQVTDHNS ASTMSSEDAN LSKHPDLHVD TDVDDDDDVD PSVTQAILEK YDRESITRHI
TQGPVKYIIA AICIFYSIFH LYITFNPMPS LLQRSVHVGV GFALIFLIFP ASKKSSRKKV
AWYDWIWFLL SFSGMAYLIY EYQEIVTSRG GMANSVDVIF SIITVICVLE GSRRITGWIL
PILASIFLLY PFISHLDFMP NRLLTRPYDF GDIFGQLFLK TEGLYSVAIG ASVTFIFLFI
LFGAFLARSG MGQLFNDLAL ALAGDKKGGP AKVAVISSGF MGSINGSALS NVVSTGAFTI
PLMKKVGYHK DFAGAVEASA SVGGQILPPI MGASAFIMAE TTGLPYSTIA LAALLPAILY
YLGVIAQVHF RAGRRDLKGM AKESLPQVKE VLKARGHMLL PIVFLIYLLI QNVPVGYAAA
YTIGFTVVIS MLRKETRMGF KDILGALEDG ARQSLAVMAA CAVVGIIIGV VSLTSFGTVM
TSSIVTLGAG SLLLTLILTM LASMVLGMGL PSIPAYIITA TMAAPALAGF DIPILSAHMF
VFYFGVFANI TPPVCLAAFA GAGISGGDPM TTGYLSLKLA LAGFIVPFMF IYNPAMLMID
PTDLAVTAKA FPLPPVIDIV IAVVTSVIGV IGLSAALEGY FKSDMNVVTR LILALGALLL
IYPGLITGVI GGVIVLGIAA FNIKGSKAPT ALSV
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