Gene Psyc_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0738 
Symbol 
ID3514584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp879961 
End bp880893 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID637669425 
Productlysophospholipase 
Protein accessionYP_264026 
Protein GI71065299 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000217511 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA CTGAACAAAT CACCTCTTCT GACAATACTC ATTATCTGCA TCATACCTTT 
TTTGAGCCGA GTAATAGTGA TACCGCCATT AGCGCAACCT TGCTGATTGT ACACGGCATG
GCAGAGCACA GCGGGCGTTA TGCAGACTTG GCTCAATTTT TAGCCGATCA CGGTATTGCG
GTCGCCACTT ATGATCAGCT TGGTCATGGA AAAACCGTCA AATCCGCTAA AGATTTGGGG
TTTTTTGGTG AAGAGCATCC TGTGCAGTCA CTATTAAAAG ATGTCATCGT CATGGCAGAC
AGCTTAAAAG TGCGTCATCC GAATGTGCCT CACTTCGTCA TGGGTCACTC TATGGGCTCG
TTTATCGTAC GTAACGTCCT AAAGCATCAT GCACGTAACT TTACCGGTGC TATCTTAATG
GGTACAGCTG ACGCCAATCC ATTGACCAAA GTATTATTGC CGGTCAATAA GTTACTGGCA
AAAGCGGCGC CTAAAAAGCC AAATACCCTG TTTGCTAACG TGATGAATAA AGTACTCAAT
AGCAAGCTCA ACAATCGTAT TTCTTCATCG AAGTTTGCGT GGTTGAACGA AGACCCTGCC
GCCGTTGAAG CTTATGAAGC CGATCCATTG ACAGGTTTTG ACCTTACCAA TAACGGCTTT
ATGACCCTCT TTACACTGAT GGACGCAGGC TTGCATAAGA ACTGGGCAAT GACGATTGCC
AAAGATTTTC CGATTTTATT GATCAGTGGC GAAAATGACC CCATCGGTGA TATGGGTCGC
GGCATTCGCA ACATTGCCAA CCGCTTAGAC AGACAGCATT TTGATCATGT CTCTGTGCAG
CTCTACCCTC ATATGCGCCA TGAGCCGCTA CACGAACAGA ATAAAGAGCA GGTTTATCAA
GACATCTTAG GCTGGATAAA TAATAATACT TAA
 
Protein sequence
MSNTEQITSS DNTHYLHHTF FEPSNSDTAI SATLLIVHGM AEHSGRYADL AQFLADHGIA 
VATYDQLGHG KTVKSAKDLG FFGEEHPVQS LLKDVIVMAD SLKVRHPNVP HFVMGHSMGS
FIVRNVLKHH ARNFTGAILM GTADANPLTK VLLPVNKLLA KAAPKKPNTL FANVMNKVLN
SKLNNRISSS KFAWLNEDPA AVEAYEADPL TGFDLTNNGF MTLFTLMDAG LHKNWAMTIA
KDFPILLISG ENDPIGDMGR GIRNIANRLD RQHFDHVSVQ LYPHMRHEPL HEQNKEQVYQ
DILGWINNNT