Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0738 |
Symbol | |
ID | 3514584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 879961 |
End bp | 880893 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669425 |
Product | lysophospholipase |
Protein accession | YP_264026 |
Protein GI | 71065299 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000217511 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAATA CTGAACAAAT CACCTCTTCT GACAATACTC ATTATCTGCA TCATACCTTT TTTGAGCCGA GTAATAGTGA TACCGCCATT AGCGCAACCT TGCTGATTGT ACACGGCATG GCAGAGCACA GCGGGCGTTA TGCAGACTTG GCTCAATTTT TAGCCGATCA CGGTATTGCG GTCGCCACTT ATGATCAGCT TGGTCATGGA AAAACCGTCA AATCCGCTAA AGATTTGGGG TTTTTTGGTG AAGAGCATCC TGTGCAGTCA CTATTAAAAG ATGTCATCGT CATGGCAGAC AGCTTAAAAG TGCGTCATCC GAATGTGCCT CACTTCGTCA TGGGTCACTC TATGGGCTCG TTTATCGTAC GTAACGTCCT AAAGCATCAT GCACGTAACT TTACCGGTGC TATCTTAATG GGTACAGCTG ACGCCAATCC ATTGACCAAA GTATTATTGC CGGTCAATAA GTTACTGGCA AAAGCGGCGC CTAAAAAGCC AAATACCCTG TTTGCTAACG TGATGAATAA AGTACTCAAT AGCAAGCTCA ACAATCGTAT TTCTTCATCG AAGTTTGCGT GGTTGAACGA AGACCCTGCC GCCGTTGAAG CTTATGAAGC CGATCCATTG ACAGGTTTTG ACCTTACCAA TAACGGCTTT ATGACCCTCT TTACACTGAT GGACGCAGGC TTGCATAAGA ACTGGGCAAT GACGATTGCC AAAGATTTTC CGATTTTATT GATCAGTGGC GAAAATGACC CCATCGGTGA TATGGGTCGC GGCATTCGCA ACATTGCCAA CCGCTTAGAC AGACAGCATT TTGATCATGT CTCTGTGCAG CTCTACCCTC ATATGCGCCA TGAGCCGCTA CACGAACAGA ATAAAGAGCA GGTTTATCAA GACATCTTAG GCTGGATAAA TAATAATACT TAA
|
Protein sequence | MSNTEQITSS DNTHYLHHTF FEPSNSDTAI SATLLIVHGM AEHSGRYADL AQFLADHGIA VATYDQLGHG KTVKSAKDLG FFGEEHPVQS LLKDVIVMAD SLKVRHPNVP HFVMGHSMGS FIVRNVLKHH ARNFTGAILM GTADANPLTK VLLPVNKLLA KAAPKKPNTL FANVMNKVLN SKLNNRISSS KFAWLNEDPA AVEAYEADPL TGFDLTNNGF MTLFTLMDAG LHKNWAMTIA KDFPILLISG ENDPIGDMGR GIRNIANRLD RQHFDHVSVQ LYPHMRHEPL HEQNKEQVYQ DILGWINNNT
|
| |