Gene Psyc_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0737 
SymboldapD 
ID3514583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp879028 
End bp879849 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID637669424 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_264025 
Protein GI71065298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0191935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC AACAAACCAT CGAACAAGCT TTTGAGAACC GCAACGAATA TAGCCCAGCA 
ACCATGCCAC AAGATGTCCG TGATGCCATC AATCAAGTGC TTGAGCAGCT AGATAACGGC
ACTTTGCGCG TTGCAGAAAA AAAGGATGGC GAATGGGTCG TCAATCAGTG GGCAAAAAAA
GCCGTCTTGC TATCGTTCCG CCTAAATGAC AACTACGTTC AAGCAGCGGG CGAGCATATA
CAGTTTTATG ACAAGGTGCC AACGAAATTT GCTGATTGGA CAGAAGCACA GTTTAAAGAA
GCCGGCGTAC GTGTAGTACC ACCAGCCGTT GCTCGTAAAG GCTCATATAT CGCACCAGGT
GCCGTACTAA TGCCATCGTA TGTCAACATC GGTGCTTATG TTGATCAAGG TGCTATGGTA
GATACATGGG CGACAGTTGG TTCATGTGCT CAAATCGGTA AAAACGTCCA TCTATCAGGC
GGCGTCGGTA TCGGTGGTGT CTTAGAACCA TTACAAGCCA ATCCGACTAT CATCGAAGAC
AACTGCTTTA TCGGTGCGCG CTCTGAAATC GTTGAAGGCG TCATCGTAGA AGAAGGCGCA
GTTATCTCTA TGGGTGTCTA TATCGGTCAG TCTACCCGTA TTTATGATCG CGAAACGGGC
GAGATTCATC GTGGTCGCGT ACCAGCAGGC TCAGTGGTTG TGCCAGGCAG CTTACCTTCT
GAAGATGGTA CACACAGCTT GTATGCTGCT ATCATCGTGA AAAAAGTAGA TGCACAAACC
CGCGCTAAAA CATCAGTAAA TGAGTTATTA CGTTTAGCCT AA
 
Protein sequence
MSLQQTIEQA FENRNEYSPA TMPQDVRDAI NQVLEQLDNG TLRVAEKKDG EWVVNQWAKK 
AVLLSFRLND NYVQAAGEHI QFYDKVPTKF ADWTEAQFKE AGVRVVPPAV ARKGSYIAPG
AVLMPSYVNI GAYVDQGAMV DTWATVGSCA QIGKNVHLSG GVGIGGVLEP LQANPTIIED
NCFIGARSEI VEGVIVEEGA VISMGVYIGQ STRIYDRETG EIHRGRVPAG SVVVPGSLPS
EDGTHSLYAA IIVKKVDAQT RAKTSVNELL RLA