| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0728 |
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| Symbol | betA |
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| ID | 3514574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 867331 |
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| End bp | 869031 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637669415 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_264016 |
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| Protein GI | 71065289 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAA CATTACCTGA GTTTGACTAC ATCATCGTTG GCGCAGGGTC AGCAGGCAAT
GTGCTGGCCA CACGCTTGAC CGAAGATGAC GATATTAACG TACTGCTACT AGAGGCCGGT
CGTCCAGATC ATCGTCTCGA CTTTCGCACC CAAATGCCAG CTGCTTTGGC AATGCCATTG
CAAGGCACTA CTTATAACTG GGGCTACAAA ACCGACCCCG AGCCTTATAT GAATAACCGT
GTCATGGACT GTGGTCGCGG TAAAGGGCTT GGTGGCTCCT CCCTAATTAA TGGGATGTGC
TATATCCGCG GCAATGCCTT GGATTTTGAC GATTGGGCCA AAATAGAAGG GCTAGAGGAC
TGGACCTATT CAGATTGTCT GCCTTATTTT AAAAAGCTAG AAAACCGTGA TGCGGGCGAG
AATGACTATC ATGGCGTGGG CGGCCCTGTT GAGATGACCA CCTCAAAACC GGGGGTTAAC
CCGCTGTTTC AAGCTATGAT TGAAGCGGGT GTGCAAGCCG GCTACCCGAG CACCGAAGAT
TTAAACGGCT ATCAGCAAGA AGGTTTTGGC CCGATGGATC GTTTTGTCAC GCCAAATGGT
CGCCGTGCGT CAACCGCACG AGGCTATCTT GACCAGGCCA AGCCGCGCAG CAACCTGACG
ATTTTGACGG GTGCATTGAC CGATGTGATT TTGTTTGATG GCAAACGTGC CATTGGCGTT
AAGGTCGAGC ACGGCGGTCA GACCAAGAAT TTTTATGCCT CTCGTGAAGT GATTGTGTCC
TCTGGCGCGA TTGCTTCGCC GCAACTGCTC CAGCGTTCAG GCATTGGCCC TGAACAGTGG
CTTAAAGAGT TGGGTGTGCC AGTGGTGTTA GATTTACCAG GCGTGGGCAA CAATTTACAA
GACCATTTAG AGCTGTATAT GCAGTATGAA TGTACCCAAC CGGTCTCGAT TGCTCCTGCC
AATAAATGGT GGAATAAGCC CGCTATTGGT GCAGAATGGT TATTCAAGGG TACTGGCCTT
GGCGCATCCA ATCAGTTTGA AGGGGGCGGT TTTATCCGTA CCGATGAGAC GTTTACCCAT
CCAAACATCC AGTATCATTT CTTACCACTT GCGGTTCGTT ATGATGGCCG CAGTGCCAGT
GATTCTCATA GCTTTCAGGC GCATGTTGGC TCATTGCGTT CACCAAGTCG TGGCCGCGTG
AAGCTGACCT CGCGCGATCC AAGTGCCCAT CCTAGTATCT TGTTTAATTA TATGTCTCAT
GATCAAGATT GGCGTGAGTT CCGTGCAGCA ATGCGCATCA CTCGTGAAAT TATGCATCAA
CCTGCACTTG ATCCGTACCG TGGCCGTGCC ATCTCTCCTA GTGAAGACTT GGTGACTGAC
GAGCAGTTAG ACGACTACGT TCGTGAAAAC AGCGAGACCG CTTATCATCC GTCGTGCACA
TGTGCGATGG GCGAGCACAA AGATGCAGTG GTTAATGGCG AAGGGCTGGT ACATGGCATT
GAGAGCCTGC GAGTAGTGGA TGCCTCCATT ATGCCCAACA TCATCAGTGG TAATCTCAAC
GCGACCACCA TTATGATGGC AGAAAAAATT GTCGATAAAA TGAGAGGCGT ACAGCTGCCC
CGTTCAACCG TAGATTATTA CGTTGCGAAT GGCGCGCCAC TCAGAGCGGA GCCAATGCGG
GATTATAGCC CTGCTCAATA A
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| Protein sequence | MSSTLPEFDY IIVGAGSAGN VLATRLTEDD DINVLLLEAG RPDHRLDFRT QMPAALAMPL
QGTTYNWGYK TDPEPYMNNR VMDCGRGKGL GGSSLINGMC YIRGNALDFD DWAKIEGLED
WTYSDCLPYF KKLENRDAGE NDYHGVGGPV EMTTSKPGVN PLFQAMIEAG VQAGYPSTED
LNGYQQEGFG PMDRFVTPNG RRASTARGYL DQAKPRSNLT ILTGALTDVI LFDGKRAIGV
KVEHGGQTKN FYASREVIVS SGAIASPQLL QRSGIGPEQW LKELGVPVVL DLPGVGNNLQ
DHLELYMQYE CTQPVSIAPA NKWWNKPAIG AEWLFKGTGL GASNQFEGGG FIRTDETFTH
PNIQYHFLPL AVRYDGRSAS DSHSFQAHVG SLRSPSRGRV KLTSRDPSAH PSILFNYMSH
DQDWREFRAA MRITREIMHQ PALDPYRGRA ISPSEDLVTD EQLDDYVREN SETAYHPSCT
CAMGEHKDAV VNGEGLVHGI ESLRVVDASI MPNIISGNLN ATTIMMAEKI VDKMRGVQLP
RSTVDYYVAN GAPLRAEPMR DYSPAQ
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