Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0719 |
Symbol | |
ID | 3514565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 857655 |
End bp | 860012 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669411 |
Product | Signal transduction histidine kinase sensor |
Protein accession | YP_264012 |
Protein GI | 71065285 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00268576 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTTG TTGGTCGGTT TGGTAGTATT TCCACCCGTA TATTGATTAT CTTAACATTG GCTTTTTTAC TTATTATTTT GATGGTCTAT TGGGTCATCG AAACCCAAGC TAAGCCGCGC ATACTGGAGA TGACCTCAGA GACAGTGGTT GAAACAGGTA ACGAAGCCAT TAACAGCATC ATGGCGAGTA TCAATCATGT CGATGGAATG GCGAAAGCCA CCAGTACGAT GGCGGGCGGC TTGCCAAAAC AAGACGCCCT TTATAAAGAA ACCTTTGGCA ATCTCATGCA ACAAACGGAT CAACGTATTG TAGGCGGCGG TGTGTGGTTT GACCCTAATA TGTACGCTCA GGGCCGAGAG CGGCAGTCGT TTGTATGGGC ACGTGATGAG TCAGGCACCA TGCAGCCATT AGAGCGTTAC AATCAAGCAC GCCAAACGCC TAATCCCTAT TATCGTGATT GGTGGTATAT TCCTGCGATG TACGCGCGTC ATGACCATTG TGTCTGGAGC CGTGCCTATG TCGATCCAGT GAGTAATCAG CCGATGATGA CGTGCGCCAA GGCTCTGTAT GACAGTCGCA ATCAAGCTTT TGATGGGGTG GTGAGTTTCA ATCTGCTATT GGACAACCTC GGCGATGCCA TGAAAAAGTG GCAAGATAAG CTCGGCGGTT ATGTCTTTTT AGTAGACCTA GACAATCGGT TTTTGACTTT TCCAGATCAG TCGAAAGTCA TGCATACAAC TGAAGATAGT CGCCAAGGCG AGGTCATAAC GGCACGTCAG TTGGCAGATG CCAACCCTAA CTTTGCCCCT ATCGCGGACA GTCTAGATAG TATTAATCAG ACACTGATAG ATGAGGCGGT AGCTAAAGAT AAAAGCCGTT ATACGCTCGC TGCACGTAGT ATTCTAAGTA CGACCAATCT GGATAAAATC AGCGAGCAAG AGTCCAAGTT GCTCTCAGCA TTATTACTGT TAAATATCGA CCAAACGTTT AATTTGGTAG AGAGTCATTT GGTCGATACC ATCGCTGTGC CCAATGATTT TGTGTTGCAG CAGCCCGCCA CTGCTTTTGT CTTTCGCATG CCGTTTACGT ATTGGAAGAT GGTTATCGTC AAGCCTGATA ATGACATGAT GAGCGTGGCA AATGCCCTGT CCAATAAACT GATTCAAGCC ATGCTGCTGG GTTTCATTCC TATCTTATTG TTGACCGCAT GGGTGTTTCG TCGCTATTTT ACGCGGCCGC TAAAGCGCAT GGCACAGTCG GTGGCTGATA TGGGGGCGTT AATTGAACAA AAAAAATATC AACAATTAAG CGCGCACAAA CTGCCTCATT CAAATGTCAG CGAAATTCAA ATCATCAGTG AGCAGACCAA TCAACTGATT GATCGCGTCG TCGAGAATGA AGGCGCACTT GCTGAAATTA ATGTTCATCT AGAAAAACAA GTCGCCGCCC GCACGCAAGA CTTACAGCAA GCCATGGATG AATTAAAAGC CTCACAAGTA CATCTGGTGC GCTCCGAAAA AATGGCTACG CTTGGCCAAA TGGTGGCAGG TGTGGCGCAT GAAGTCAACA CGCCGCTGGG CTACGTGCGA AGTAACATGG AATTGGTTGG CGATAATCTC ATACGTTTTG ATGAGTTGCT ACAGCATAGC GATCAATTAT TGCATGCCTT AAAAGCGCCA ACCATCAATC AAGAACAAGT CGAGCAACTG ATAGAGCAAA CCTTACAATG CTGCGAAGAG ATTAAAGAAG ATGAGGTCAG TGAAGATTTG GCAGAGTTGA TTAAAGATGG ACTTTATGGC GTCGATCAGA TTGCTGAACT GGTAGTCGGC TTGCGCAACT TTTCTCGAAT TGACGAATCT AAGGTAAAAG ATGTCGATAT CAATGATTGC ATCAATACCT CATTGATTAT GGCGCGCAAT AACTTAAAAA ATTTAGACGT CAATACCAAT CTAGCCGAGC TGCCGCTGAT TCAATGTAAT CCTTCACAAA TCAACCAAGT ATTATTAAAC CTGTTTAATA ATGCCGCCCA AGCCATGCCG ATTGATCATA AAGGGGTATT ACAGGTCAAC TCGTCTGTCG ATAAGGCGCA GCAGCACATC ATAGTGAGTG TCAAAGACAA TGGTGTCGGT ATCCAAGAAA GTACGCTGGC GCAGATTTTT GAGCCGTTTT TTACCACCAA AAAAGCAGGT GATGGCACAG GGTTAGGGCT GGCCATTACG GCACAAATCA TCGAGCAACA TGCTGGAGGC ATCGAGGTTA GCTCAAGCGT TGGCGAAGGC ACGACGTTTA CCATCAAATT ACCGATACAG TCTATCGCTC ATAAAAACAA ACCTCCACAA GCCTTATTCG AAAGTTGA
|
Protein sequence | MKVVGRFGSI STRILIILTL AFLLIILMVY WVIETQAKPR ILEMTSETVV ETGNEAINSI MASINHVDGM AKATSTMAGG LPKQDALYKE TFGNLMQQTD QRIVGGGVWF DPNMYAQGRE RQSFVWARDE SGTMQPLERY NQARQTPNPY YRDWWYIPAM YARHDHCVWS RAYVDPVSNQ PMMTCAKALY DSRNQAFDGV VSFNLLLDNL GDAMKKWQDK LGGYVFLVDL DNRFLTFPDQ SKVMHTTEDS RQGEVITARQ LADANPNFAP IADSLDSINQ TLIDEAVAKD KSRYTLAARS ILSTTNLDKI SEQESKLLSA LLLLNIDQTF NLVESHLVDT IAVPNDFVLQ QPATAFVFRM PFTYWKMVIV KPDNDMMSVA NALSNKLIQA MLLGFIPILL LTAWVFRRYF TRPLKRMAQS VADMGALIEQ KKYQQLSAHK LPHSNVSEIQ IISEQTNQLI DRVVENEGAL AEINVHLEKQ VAARTQDLQQ AMDELKASQV HLVRSEKMAT LGQMVAGVAH EVNTPLGYVR SNMELVGDNL IRFDELLQHS DQLLHALKAP TINQEQVEQL IEQTLQCCEE IKEDEVSEDL AELIKDGLYG VDQIAELVVG LRNFSRIDES KVKDVDINDC INTSLIMARN NLKNLDVNTN LAELPLIQCN PSQINQVLLN LFNNAAQAMP IDHKGVLQVN SSVDKAQQHI IVSVKDNGVG IQESTLAQIF EPFFTTKKAG DGTGLGLAIT AQIIEQHAGG IEVSSSVGEG TTFTIKLPIQ SIAHKNKPPQ ALFES
|
| |