| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0682 |
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| Symbol | ispG |
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| ID | 3516142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 810359 |
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| End bp | 811474 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669372 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_263975 |
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| Protein GI | 71065248 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000953854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACGT CAGCGCCTAT TAATCGTCGT CTTACTAAGA AAATATATGT CGGTGATGTC
GCGATTGGTG GTGATGCGCC GATTAGTGTG CAAAGTATGA CCAATACCGA TACCTGCGAT
GTGGCAGCGA CTGTTGCCCA AATTGAGCGC TGTGTTGAAG CAGGCGCTGA TTTGATGCGC
GTCTCTACCC CGACGATGGA TACCGTTAAA GCATTTGGTG AAATTCGCAA ATTGGTCAGC
GTACCCTTGA TAGCGGATGT GCATTTTGAC CACAAAATTG CTTTAGCGGT TGCGGCAGCG
GGCGCAGATT GTCTGCGTAT TAACCCAGGC AATATCGGTA GCGACGCCAA AGTACGTGAA
GTCGTTGCCT GTGCCAAGCA CTATAATATT CCTATTCGTA TCGGCGTCAA TGCTGGCTCT
TTAGAAAAAG ACATTCAGCG TAAGTATAAA GAGCCAAATG GTGCAGCAAT GCTGGAATCA
GCAATGCGTC ATATTGATAT ATTAGAGCGC CTTAATTTTG ATCAATATAA AGTGTCTGTC
AAAGCCAGCA ATGTGTTTTT GACCATGGAT GCGTACCGTC TGATCTCAGC ACAGATTGAT
AATCCGCTGC ATTTAGGCGT TACGGAAGCC GGTGTCTATC GTACTGGTTC GGTCAAATCT
GCCATCGCGC TTGGTGGTTT ATTATTGGAC GGTATTGGGG ATACGATTCG TATTTCCTTG
GCAGCCGAGC CAGAAGAAGA GATTAAAATT GGTTTTGATA TCTTAAAATC ACTCAATATT
CGCTCTAATG GTGTCAACTT TATTGCTTGC CCAAGCTGCT CACGCCAAGA GTTTGACGTA
ATTAGAGTAA TGACCGCGTT AGAGTCGCGT TTAGAAGACA TTCGTGAGCC AATGAATTTG
TCAGTGATTG GCTGCAAAGT AAATGGTCCG GGTGAAGCAA AAGAAGCCGA TATCGGTATC
GTTGGTGCTG CACCAAAATC GCTGGTCTAC CGTATGGGCG AAAAAAGCCA TCTGATTGAT
ACCGATAATT TGGTCGATGA GATAGAAGGG ATGGTACGCG CTCATGCAGA AGAATTGGCG
AAAAAACGTG AAAATGAGAT TATTCGCGTT AGATAA
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| Protein sequence | MSTSAPINRR LTKKIYVGDV AIGGDAPISV QSMTNTDTCD VAATVAQIER CVEAGADLMR
VSTPTMDTVK AFGEIRKLVS VPLIADVHFD HKIALAVAAA GADCLRINPG NIGSDAKVRE
VVACAKHYNI PIRIGVNAGS LEKDIQRKYK EPNGAAMLES AMRHIDILER LNFDQYKVSV
KASNVFLTMD AYRLISAQID NPLHLGVTEA GVYRTGSVKS AIALGGLLLD GIGDTIRISL
AAEPEEEIKI GFDILKSLNI RSNGVNFIAC PSCSRQEFDV IRVMTALESR LEDIREPMNL
SVIGCKVNGP GEAKEADIGI VGAAPKSLVY RMGEKSHLID TDNLVDEIEG MVRAHAEELA
KKRENEIIRV R
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