Gene Psyc_0659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0659 
Symbol 
ID3514019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand+ 
Start bp781860 
End bp782537 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID637669349 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_263952 
Protein GI71065225 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.116739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.867777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA TCGTTGCTGC AATAGGGGAG TGGAACAAAG CATTATTTGA CGAGTATGTT 
GTTAAGCTTT CGGGTAATTG GGCTTATGTC TCTACTCCAA CCGAATTAAA AGCTAAGCTA 
GCAACAGGCT TTGACCCGAA GTATATATTT TTCCTACATT GGCGTTGGAT TGTACCTGTC 
CAGATACTTA GCGAATTTGA ATGCGTCTGT TTTCATATGA CTGATGTTCC TTATGGCCGA 
GGTGGCTCGC CACTACAAAA TCTTATAGTT CGCGGTCATA AAGATACGGT ATTAACCGCA 
TTAAAAATGG AAAAAGGTTT AGATACTGGG CCAGTTTACT TAAAGGAAGC GTTTAATTTA 
GCAGGTAGTG CAGAGGCTAT TTATAATCGT GCTAGTCAAA CTGCATGGGA TATGATTAAA 
AATATCATTG CAAATGAACC ACAGCCCATT CCACAGCAAG GTGATACTGT AAATTTTCAG 
CGTCGTACAC CTAAGCAGAG TGAAATACCT AATGATTTAA CAGTAGAACA GTTATATGAT 
TATATACGTA TGTTGGACGC CCCAGGATAT CCTAAAGCTT TTATAGATAA AGGATCATAC 
CAACTAGAAT TTGATCAAGC TGAACTAGCT ACAAATACTG TGACTGCTCG AGTAAAAATT 
AAATTAAAGG ATATATAA
 
Protein sequence
MNYIVAAIGE WNKALFDEYV VKLSGNWAYV STPTELKAKL ATGFDPKYIF FLHWRWIVPV 
QILSEFECVC FHMTDVPYGR GGSPLQNLIV RGHKDTVLTA LKMEKGLDTG PVYLKEAFNL 
AGSAEAIYNR ASQTAWDMIK NIIANEPQPI PQQGDTVNFQ RRTPKQSEIP NDLTVEQLYD 
YIRMLDAPGY PKAFIDKGSY QLEFDQAELA TNTVTARVKI KLKDI