Gene Psyc_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0647 
Symbolwza 
ID3514387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp767827 
End bp768903 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content44% 
IMG OID637669337 
Productpolysaccharide export system, outer membrane component 
Protein accessionYP_263940 
Protein GI71065213 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.428631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCA ATTCATCAAG GTTATTAAGT ATAACGTGTC TGCTAATGAT TAGTCTGGTT 
TCAGGGTGCT CTAGTATCAA TGCAGGACTG CAAGTAGGCG AGCTGCCACC GAGTGGTGCA
TTTATCGCTG AAAATGGGTT GCATTTTAAT GTTCAACCGC TAAGCCTAGC AACGTTACCG
CCAAAACAAG CGGTTGTTCG ACCCACTAGT GACTTGTCTC GACTGATTAA AACTTCCAAT
CGCGTAGACT ATCGCATTGC TCAAGGCGAC ATTCTCAATG TTGTCCTTGT CGAGTATCCA
AATATCAATG CCTCAACCTC GAGTCTAACG GTCGATCAGC AAGGCTTTGT TCAAATTCCT
CTAATAGGTC GTATTAAAGC CAGTGGTATG AGTGTCCCGC AATTCACCGC AAACCTACGC
GGGCAGTTGC AACGCTATCT CAAATATTCA GACCCACAAG TCAAAGTTAT CGACTATCGC
GGCAATACAT TTATTGTTGA TGGTGAAGTC AGTAAAATGG GCGAATTCAA TATCACCGAC
GCCCCCGTCT CTCTCTATAG CGCCATTTCT ATGGCAGGTG GCGTAACCGC TACTGGCGAT
TCAAACAACA TCGTATTGAA TCGTCGTGGG GCAAGTTACA ACATAAACCT ATCCTCACTT
CGACAAATAG GCTCATCGGC CAACCAAATT TATGTACAAG ATGGCGACTC AATTCATATC
AATACCCTAG ACATTAATAA AGTATATGTC TTAGGTGAGT TTGGACGAGT CGCGCCTGTT
CCTATTCTCG AGCAAGGATT AAATTTGGCT CAAGTATTGG GGGAGTCTGC AGGTCTTAAT
TCTAGTACCG CCAATGCCGC CAAGATATAC ATCGTCCGTG ATAATGTTAA TACAAGGGCT
ACGGATATTT ATTATGTTGA TATGCAGACG ATTACCAGCT TTGCGCTTGC CAATCGTTTT
GAGATGCGTG CCAATGATAT TGTCTATGTA GATCCAACTG GCTTGACGCG TTGGAATCGC
GTACTTAGTT CGCTCTTACC TTCTACATCA GCGGTCAGAA GTCTATCAGG ATTATAA
 
Protein sequence
MFFNSSRLLS ITCLLMISLV SGCSSINAGL QVGELPPSGA FIAENGLHFN VQPLSLATLP 
PKQAVVRPTS DLSRLIKTSN RVDYRIAQGD ILNVVLVEYP NINASTSSLT VDQQGFVQIP
LIGRIKASGM SVPQFTANLR GQLQRYLKYS DPQVKVIDYR GNTFIVDGEV SKMGEFNITD
APVSLYSAIS MAGGVTATGD SNNIVLNRRG ASYNINLSSL RQIGSSANQI YVQDGDSIHI
NTLDINKVYV LGEFGRVAPV PILEQGLNLA QVLGESAGLN SSTANAAKIY IVRDNVNTRA
TDIYYVDMQT ITSFALANRF EMRANDIVYV DPTGLTRWNR VLSSLLPSTS AVRSLSGL