Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0625 |
Symbol | |
ID | 3514747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 742743 |
End bp | 743618 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669315 |
Product | small-conductance mechanosensitive ion channel |
Protein accession | YP_263918 |
Protein GI | 71065191 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.286405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTT TAGGTTTTAC CCTTGATGTT GCCACCTTAA CCAATAACGC TTTGAGCCTT GCTGCCAAAG TTGCGTTAGC GCTGCTAATA TTCATTGTAG GGCGCTGGCT TGCCAAAAAA GCGGTGACAT TCACGCATAA GATTATGTTG CGCAGTCACT TAGATGATAC AGTCGCCAAT TTTTTAGGTC GGCTCATCTA TGGCATGTTA CTAGTGATAG TAGTGTTGGC AGCGCTGAGT AAAGTTGGGG TACAAACCAC CTCGGTCGTT GCTATCTTAG GCGGTGCAGC GGTTGCGATT GGTTTATCGC TTAAAGATCA GCTGTCTAAT TTTGCAGCGG GCATTATGAT TGTCACCTTT CGCCCCTTTG TACGCGGCGA CTATGTGCAA ATCAGTAGTT ATACAGGCAC CGTGACAGAA ATTACCTTGG TTAATACCCA TCTAACGACG ATTAATAATC ATGATGTTAT CATTCCTAAT AGTGATATCA CCACTTCAGC GGTCATCAAT TACACCGCAT TGCCCAACCG CCGCGTCGAT ATCACCGTTG GTATTGGTTA TGATGCTGAT ATCAAAACTG CCAAAGATGT TATGCTAAAT TTGGCAATCA GCAATCCGAA GGCGTTTACT GATCCTGCAC CGGTTATCCG CGTTACCAAC TTGGGCGATA ACTCCGTTGA TTTAACCTTG AATGTTTGGA CAACCAATGA TGATTGGTGG TCAATGCAGT GCGATCTATT GGAACAGTTT AAATATGCGC TAGACGATAA TAAAATTGAT ATTCCATTCC CGCAGCGCAA TGTCCATGTT AAAGGACTTG ACCAGATGAT TAATCAAATG GATCAAGCGC AAAAACTGCT AACGAAAAAA GATTAA
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Protein sequence | MEFLGFTLDV ATLTNNALSL AAKVALALLI FIVGRWLAKK AVTFTHKIML RSHLDDTVAN FLGRLIYGML LVIVVLAALS KVGVQTTSVV AILGGAAVAI GLSLKDQLSN FAAGIMIVTF RPFVRGDYVQ ISSYTGTVTE ITLVNTHLTT INNHDVIIPN SDITTSAVIN YTALPNRRVD ITVGIGYDAD IKTAKDVMLN LAISNPKAFT DPAPVIRVTN LGDNSVDLTL NVWTTNDDWW SMQCDLLEQF KYALDDNKID IPFPQRNVHV KGLDQMINQM DQAQKLLTKK D
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