Gene Psyc_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0625 
Symbol 
ID3514747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp742743 
End bp743618 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content43% 
IMG OID637669315 
Productsmall-conductance mechanosensitive ion channel 
Protein accessionYP_263918 
Protein GI71065191 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.286405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TAGGTTTTAC CCTTGATGTT GCCACCTTAA CCAATAACGC TTTGAGCCTT 
GCTGCCAAAG TTGCGTTAGC GCTGCTAATA TTCATTGTAG GGCGCTGGCT TGCCAAAAAA
GCGGTGACAT TCACGCATAA GATTATGTTG CGCAGTCACT TAGATGATAC AGTCGCCAAT
TTTTTAGGTC GGCTCATCTA TGGCATGTTA CTAGTGATAG TAGTGTTGGC AGCGCTGAGT
AAAGTTGGGG TACAAACCAC CTCGGTCGTT GCTATCTTAG GCGGTGCAGC GGTTGCGATT
GGTTTATCGC TTAAAGATCA GCTGTCTAAT TTTGCAGCGG GCATTATGAT TGTCACCTTT
CGCCCCTTTG TACGCGGCGA CTATGTGCAA ATCAGTAGTT ATACAGGCAC CGTGACAGAA
ATTACCTTGG TTAATACCCA TCTAACGACG ATTAATAATC ATGATGTTAT CATTCCTAAT
AGTGATATCA CCACTTCAGC GGTCATCAAT TACACCGCAT TGCCCAACCG CCGCGTCGAT
ATCACCGTTG GTATTGGTTA TGATGCTGAT ATCAAAACTG CCAAAGATGT TATGCTAAAT
TTGGCAATCA GCAATCCGAA GGCGTTTACT GATCCTGCAC CGGTTATCCG CGTTACCAAC
TTGGGCGATA ACTCCGTTGA TTTAACCTTG AATGTTTGGA CAACCAATGA TGATTGGTGG
TCAATGCAGT GCGATCTATT GGAACAGTTT AAATATGCGC TAGACGATAA TAAAATTGAT
ATTCCATTCC CGCAGCGCAA TGTCCATGTT AAAGGACTTG ACCAGATGAT TAATCAAATG
GATCAAGCGC AAAAACTGCT AACGAAAAAA GATTAA
 
Protein sequence
MEFLGFTLDV ATLTNNALSL AAKVALALLI FIVGRWLAKK AVTFTHKIML RSHLDDTVAN 
FLGRLIYGML LVIVVLAALS KVGVQTTSVV AILGGAAVAI GLSLKDQLSN FAAGIMIVTF
RPFVRGDYVQ ISSYTGTVTE ITLVNTHLTT INNHDVIIPN SDITTSAVIN YTALPNRRVD
ITVGIGYDAD IKTAKDVMLN LAISNPKAFT DPAPVIRVTN LGDNSVDLTL NVWTTNDDWW
SMQCDLLEQF KYALDDNKID IPFPQRNVHV KGLDQMINQM DQAQKLLTKK D