| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0624 |
|---|
| Symbol | |
|---|
| ID | 3514746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 741705 |
|---|
| End bp | 742676 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637669314 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_263917 |
|---|
| Protein GI | 71065190 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGC CAGCATGGGC AATAGATATG GATATTACCA CGTTTATTGA TGACCGCCTT
TATATTCATA AGCTGAGACT GACTGCGGTG TATATTAAAG ACTCACAGAG CTACCATTTT
TCAGCGCAAG CACCAAAGCG CGATATCAGC TTGCCGATGG CGATTGTCAT TGCCATCACG
GTGCATGCGT TGATTATTTT TGGTGTCAGT TTTTCGATGG GGCAAGACCC TGCCGGATTG
ATGCAAGACG TTGCTAAAGC CCTGACGGAT AATATGCAGC CAAATGAAGA TGCGCAGTTT
ATTGCCAATG CTTCACAGCA AGGCGGCGGC ACCGTGCAAG AGCAATTGCG CCAAGAAACC
GACCAAAGCA GTCCTTTGTC CGCTGAACAA ATGAGTGAGA CGCAAGATGT GATTCGCTTG
CAGCGGCAAG TGCGCCAGCA GCGTTATCAA GAAAGCTACC TGCGCACGAC GCTAAGCTGG
CGTCACGCAA GCGTAGAGTC TGATAATGAC AGTAAGCAAG CGCAAGATGA TATGAGGGTG
CAAGAAGAGC GCCTGCGTAA GCAAATCGCT ACCTTGGAGG CACAGCTGTC TCAGCGTCAA
CAAACCTATG CCACCAAATC AAAAGTGGTG ACCATGGACA GTAACTCAAC GACACATGGC
GCCGCGGCAG ATTATATCAA TACCTTTCGT GAGCACGTTG AGCGCGTTGG CAACCTACAA
TATCCTGCCC AAGCACGAGC GCAAAGTATT ACGGGCGAAG TGCGCTTGAT GGTGATCATT
GCCAACGACG GTAATATCAA GGCCATCCGT TTGCTTGAGA GCTCAAATTC AACCATCTTA
GATGAGGCGG CTAAACAATC AGTTAGACAA GCCGCGCCAT TTGGTAAATT TACCGCGGAC
ATGAAAGACA TCGTTGAATT GCGTCTGATA CGTACCTATC GTTATAGTGA TACGGTAGAA
GTGACGTATT AA
|
|---|
| Protein sequence | MMAPAWAIDM DITTFIDDRL YIHKLRLTAV YIKDSQSYHF SAQAPKRDIS LPMAIVIAIT
VHALIIFGVS FSMGQDPAGL MQDVAKALTD NMQPNEDAQF IANASQQGGG TVQEQLRQET
DQSSPLSAEQ MSETQDVIRL QRQVRQQRYQ ESYLRTTLSW RHASVESDND SKQAQDDMRV
QEERLRKQIA TLEAQLSQRQ QTYATKSKVV TMDSNSTTHG AAADYINTFR EHVERVGNLQ
YPAQARAQSI TGEVRLMVII ANDGNIKAIR LLESSNSTIL DEAAKQSVRQ AAPFGKFTAD
MKDIVELRLI RTYRYSDTVE VTY
|
|---|
| |