Gene Psyc_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0624 
Symbol 
ID3514746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp741705 
End bp742676 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID637669314 
Producthypothetical protein 
Protein accessionYP_263917 
Protein GI71065190 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGC CAGCATGGGC AATAGATATG GATATTACCA CGTTTATTGA TGACCGCCTT 
TATATTCATA AGCTGAGACT GACTGCGGTG TATATTAAAG ACTCACAGAG CTACCATTTT
TCAGCGCAAG CACCAAAGCG CGATATCAGC TTGCCGATGG CGATTGTCAT TGCCATCACG
GTGCATGCGT TGATTATTTT TGGTGTCAGT TTTTCGATGG GGCAAGACCC TGCCGGATTG
ATGCAAGACG TTGCTAAAGC CCTGACGGAT AATATGCAGC CAAATGAAGA TGCGCAGTTT
ATTGCCAATG CTTCACAGCA AGGCGGCGGC ACCGTGCAAG AGCAATTGCG CCAAGAAACC
GACCAAAGCA GTCCTTTGTC CGCTGAACAA ATGAGTGAGA CGCAAGATGT GATTCGCTTG
CAGCGGCAAG TGCGCCAGCA GCGTTATCAA GAAAGCTACC TGCGCACGAC GCTAAGCTGG
CGTCACGCAA GCGTAGAGTC TGATAATGAC AGTAAGCAAG CGCAAGATGA TATGAGGGTG
CAAGAAGAGC GCCTGCGTAA GCAAATCGCT ACCTTGGAGG CACAGCTGTC TCAGCGTCAA
CAAACCTATG CCACCAAATC AAAAGTGGTG ACCATGGACA GTAACTCAAC GACACATGGC
GCCGCGGCAG ATTATATCAA TACCTTTCGT GAGCACGTTG AGCGCGTTGG CAACCTACAA
TATCCTGCCC AAGCACGAGC GCAAAGTATT ACGGGCGAAG TGCGCTTGAT GGTGATCATT
GCCAACGACG GTAATATCAA GGCCATCCGT TTGCTTGAGA GCTCAAATTC AACCATCTTA
GATGAGGCGG CTAAACAATC AGTTAGACAA GCCGCGCCAT TTGGTAAATT TACCGCGGAC
ATGAAAGACA TCGTTGAATT GCGTCTGATA CGTACCTATC GTTATAGTGA TACGGTAGAA
GTGACGTATT AA
 
Protein sequence
MMAPAWAIDM DITTFIDDRL YIHKLRLTAV YIKDSQSYHF SAQAPKRDIS LPMAIVIAIT 
VHALIIFGVS FSMGQDPAGL MQDVAKALTD NMQPNEDAQF IANASQQGGG TVQEQLRQET
DQSSPLSAEQ MSETQDVIRL QRQVRQQRYQ ESYLRTTLSW RHASVESDND SKQAQDDMRV
QEERLRKQIA TLEAQLSQRQ QTYATKSKVV TMDSNSTTHG AAADYINTFR EHVERVGNLQ
YPAQARAQSI TGEVRLMVII ANDGNIKAIR LLESSNSTIL DEAAKQSVRQ AAPFGKFTAD
MKDIVELRLI RTYRYSDTVE VTY