Gene Psyc_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0603 
SymbolnarX 
ID3514400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp717864 
End bp719987 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content40% 
IMG OID637669294 
Productsignal transduction histidine kinase sensor 
Protein accessionYP_263897 
Protein GI71065170 
COG category[T] Signal transduction mechanisms 
COG ID[COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0220625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCA ATCATTATTC CCCGTCATGC TTTCTCATAG GTAAAAGCTT ATTAATTATG 
AATAGTCGTC TATTACGCCA TTCCCTACCC CTTCATGCTT GGGGCGCTAT CTTTACTATT
TCTATCTTAT GTTTTATATC TACATTAGGT GGCGGCATGC TAGCTTGGGT GTCAGAAACA
GATGCTCAAG CCATTAACAC CGCAGGCTCG ATACGTATGG CCACTTACCG TATTAGCTTT
CAGTTGGCGA CTAATTTTTC TGAAAACAAT CCTTTTGATT TGAACATTGG TCTTAAGAAA
AATGACTTAG AAGGTAAAAA AGAAGGTACA GAGAATGTTA AGGGTGAGAA TAGAATTGGA
GAGCAAGATA AATTAAGTCC TATCCGGAAA GAAAAGACTG AAGAAATCAG CACTCTTATT
GAGGATATGG AAAGTAGGCT TGCGGAATTA CATGACTATC AATTGGCCAA TGCGAATGAC
AATGAAGGAA TCAACAACCA ACTTAAGCAA ATAGAGTCGC AGTGGTTTCG CGAGTTGAAA
CCTGCTTTGT TATCACAAGA TGCCCAAAAA TTTTATATCG TCTCGTTTAA ATACATTGAA
GACGTGGATA GCTTCGTCAA CGAGCTACAG TATAGAAATG AGCAGCGTCA GACGTGGCAG
CAAATCCTGC AAATTGTATC GTTGGTGCTG ACGGTTATCA TTATGCTAGT GGGTATGCAG
AGACTGCGTC AAAATGTACT GATACCCGTA CAACAGCTTA TTAAAGCCAA CTATAAATTT
AAACAGGGCA AGCGCAATAC TAAAGTGTCT ATATCGGGCT ATACAGAATT TAATGCACTC
GGAGATTCTT TTAATGATAT GGCGAGCACC ATTGAGACCC ATCAGCGTTC ACTTGAAAGT
GAAGTACAGA TAAAAACCCA ACATCTAGTG AAAGCCAACC AGGTGCTGTC GCTGTTTTAT
GACTTTTCTA AATCCCTAAC CACCAGTCAA GTGAGCTTGT ACAGGCTAGA TACCTTGATT
ACAGATTTTG GCAAGATCCT GCCGCACTTA GAGTTCACTT TATGCATACA GAATAAATTC
ATAAATAATA AAAACGCCAT CATCTTACAT GGTGAAAAAA TGAAAGAGCT GTGTAAGAAG
TTAAACTGTG ATAACTGTTT AACCAAAGAA GGCGTATATA CCAAATCCTA TCCTATCGCC
CACCAAAAAG TCGAATTCGG CGAGTTAAAA GTGCGGCCAA AGTCGGTCCT ACTTATCAAT
AGTACACTTT TTCCAAATAA TAATGACGGC AATACGCCGT CCTCACAGCG TATTCAGATT
GCAAAAGAAG GCAGAACCTT TTTCGAGTCT GAAATAGGTT CTGAGCTAGA CCTTGAAAAC
AATGAGCTGA TTGTAGCGCT CACCAATCTC ATCAGCACCG CTCTGTCACT ACGTAAGCAA
AGACAACAGG AACATCAGCT CATTTTATTT GAAGAGCGGT CCACTATCGC CAGAGAGTTG
CATGATTCTT TGGCTCAGTC ATTGTCTTAT CTGAAGATTC AAATCAGTGT GTTAGAGAGG
CATCTTAAAA ATGGGTCTGA CGAACAAAAT GAAGCTTCCG TCCGGCAGCA TATTGATCAA
ATAAAAGCAG GTCTTAGCTC CGCCTATCAA CAGTTAAGAG ACTTATTAAT TACCTTCCGT
CTCACCATCG ATAACGATAA TTTTGATGAA GCATTACACG AAGCCGCCAA TGAATTTGCG
CTTAAGGGTA AGTTTGAGAT TACGGTGAGT AATCGAGTGA TGACCCTGAA CTTGAGTGCC
ACTGAACAAA TTGATTTGAT CCAAATTGCT AGAGAGGCGT TGTCGAATAT TAGCAGGCAT
GCCCAAGCTG AAAACGTAGA GATTGATTTG GGTTATGACG ATGAGGACAA ATATATTGTT
ATGACCATCG TAGATAACGG TGTTGGTATA TCAGGAACCG TAGATCAAAC TCAACATCAT
GGTCTAATGA TTATGAAAGA GCGCGCTCAT AACTTAGGCG GGGAGTTGAT TGTATCTAAT
AACGAATCAC AAGGCACGAC AATAACCGCT AAGTTTGCTC CCAATTTCTT CGATGAGAAT
ATATCCAAAG AAGCTTATCT CTAA
 
Protein sequence
MLPNHYSPSC FLIGKSLLIM NSRLLRHSLP LHAWGAIFTI SILCFISTLG GGMLAWVSET 
DAQAINTAGS IRMATYRISF QLATNFSENN PFDLNIGLKK NDLEGKKEGT ENVKGENRIG
EQDKLSPIRK EKTEEISTLI EDMESRLAEL HDYQLANAND NEGINNQLKQ IESQWFRELK
PALLSQDAQK FYIVSFKYIE DVDSFVNELQ YRNEQRQTWQ QILQIVSLVL TVIIMLVGMQ
RLRQNVLIPV QQLIKANYKF KQGKRNTKVS ISGYTEFNAL GDSFNDMAST IETHQRSLES
EVQIKTQHLV KANQVLSLFY DFSKSLTTSQ VSLYRLDTLI TDFGKILPHL EFTLCIQNKF
INNKNAIILH GEKMKELCKK LNCDNCLTKE GVYTKSYPIA HQKVEFGELK VRPKSVLLIN
STLFPNNNDG NTPSSQRIQI AKEGRTFFES EIGSELDLEN NELIVALTNL ISTALSLRKQ
RQQEHQLILF EERSTIAREL HDSLAQSLSY LKIQISVLER HLKNGSDEQN EASVRQHIDQ
IKAGLSSAYQ QLRDLLITFR LTIDNDNFDE ALHEAANEFA LKGKFEITVS NRVMTLNLSA
TEQIDLIQIA REALSNISRH AQAENVEIDL GYDDEDKYIV MTIVDNGVGI SGTVDQTQHH
GLMIMKERAH NLGGELIVSN NESQGTTITA KFAPNFFDEN ISKEAYL