| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0588 |
|---|
| Symbol | nuoF |
|---|
| ID | 3514194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 699407 |
|---|
| End bp | 700831 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669279 |
|---|
| Product | NADH dehydrogenase I, F subunit |
|---|
| Protein accession | YP_263882 |
|---|
| Protein GI | 71065155 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAA CGGTTTCAGA GCAGATTGCC CTTCGCAACC AAGGCAAAGC ACCAAGCCAA
CTTAATGAGC AGTGCATTCC TATCTATGGT GACAGAGCGA CCGCTACCAG TGAAACTAAA
CCACTGACAT GGCGTCTAGC ACATCACGAT GCGGTATTAG ATTTGGCAAC TTATGAATCG
CTACGTGGTT TTGAAGCACT AAAAATAGCG TTAAACCAAT CACCAGATGA TACGTTAAAA
ACTATCAAAG AAGCGGTAGT TAAAGGACGT GGCGGTGCAG GTTTCCCAGC GGGTATTAAG
TGGTCGCTGA TGGCACCACC AGATGGTGGT CCACGCTACC TAGTTTGTAA TGCTGATGAG
ATGGAGCCGG GTACGTTTAA AGACCGTTTG CTGATGGAGC GTCTGCCACT ACAGCTTATA
GAAGGTATGC TGATTTCTGC CTACGCGATT GGTGCAACTG CTGGTTATAT CTTTATTCGC
GGTGAATATA TCTTAGCAGC GGAGCGCTTA ACCGCAGCAA TTGAAGAGTT ACGTGCCAAT
AACTTGATTG GCGATAATAT TTTAGGCTCA GATTTTAGTT TTGATTTACA TGTGCATACG
GGTGCTGGTC GTTATATTTG TGGTGAAGAA ACGGCATTGA TTAACAGCTT AGAAGGTCGT
CGTGCCAATC CGCGTACCAA ACCGCCATTT CCACAAGTGG CAGGTGCATG GGGACGTCCA
ACCGTCGTTA ATAACGTTGA AACTTTGCAT AACGTCTCAG CAATTATCCT GCATGGTAGC
AAGTGGTATC AAGACTTGCC AAAAGCCAAA GGTGTGGTCG AAACACCTGG TACTAAACTG
TTTGGTTGCT CAGGCTTGGT TAACGATCCC GGTCTTTGGG AATTACCTTT TGGTTATACG
GCACGTGAGA TCATTGAAGA TTTTGCGGGT GGTATGCAGG AAGGTCGCAC GCTTAAGGCT
TGGTTACCGG GCGGCGCATC AACGGATTTT TTAACCGCTG AACATTTAGA TACTGTTGTT
GATTTTGATA CCATTCAAAA AGCCGGTAGT CGTATGGGTA CAGGCCTGCT GATGGTCGTC
GACGAAGAGC AAGATATGGT GCCATTGGTA CGTAACCTTG AGATTTTCTT TCAGCGTGAA
TCGTGTGGTT GGTGTACGCC ATGCCGTGAT GGTCTACCGT GGGGCGTTAA AATCCTCACC
GCTATCAATG ATGGCGAAGG GCAGATGGGC GATGTTGAAA AGTTAGAAGG GTTAACCCGT
GACTTATGGA TCGGTAAAAC CTTCTGTGCC CATGCGCCGG GTGCGATGGA ACCACTCATG
AGTGCAATTA AATATTTCCG TCCTGAGTTT GATCAAAAAA TTACGCAGGC GGTTGGTGAA
GATGTCATTG AGGCTGCAGC CAGTCAACAG CTAGATGTGA AATAA
|
|---|
| Protein sequence | MRLTVSEQIA LRNQGKAPSQ LNEQCIPIYG DRATATSETK PLTWRLAHHD AVLDLATYES
LRGFEALKIA LNQSPDDTLK TIKEAVVKGR GGAGFPAGIK WSLMAPPDGG PRYLVCNADE
MEPGTFKDRL LMERLPLQLI EGMLISAYAI GATAGYIFIR GEYILAAERL TAAIEELRAN
NLIGDNILGS DFSFDLHVHT GAGRYICGEE TALINSLEGR RANPRTKPPF PQVAGAWGRP
TVVNNVETLH NVSAIILHGS KWYQDLPKAK GVVETPGTKL FGCSGLVNDP GLWELPFGYT
AREIIEDFAG GMQEGRTLKA WLPGGASTDF LTAEHLDTVV DFDTIQKAGS RMGTGLLMVV
DEEQDMVPLV RNLEIFFQRE SCGWCTPCRD GLPWGVKILT AINDGEGQMG DVEKLEGLTR
DLWIGKTFCA HAPGAMEPLM SAIKYFRPEF DQKITQAVGE DVIEAAASQQ LDVK
|
|---|
| |