Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0553 |
Symbol | groEL |
ID | 3513980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 647289 |
End bp | 648929 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669238 |
Product | chaperonin GroEL |
Protein accession | YP_263848 |
Protein GI | 71065121 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAG ACGTAAAATT CGGCATTGAT GCCCGTAAAC AAATGATGGA CGGCGTAAAC ATTCTAGCAA ATGCAGTACG TGTAACCTTA GGACCTAAAG GTCGTAACGT GGTTATCGAT AAATCATTTG GCGCGCCTAC CATCACTAAA GATGGTGTTT CGGTTGCCAA AGAAATCGAG CTTGAAAACA AATTTGAAAA CATGGGTGCA CAACTTGTAC GTGAAGTTGC TAGCCGCACT AATGATGTTG CTGGTGATGG TACAACCACT GCGACCGTAT TGGCTCAGTC AATCTTGCAA GAAGGCATGA AATCAGTTGC CGCTGGCATG AACCCAATGG ATCTGAAACG CGGTATTGAT AAAGCCGTGC GTGCTGCTGT TGAGCAAATC CATTTGCTAT CAACACCAGC TGATGATTCA AAAGCGATTG CTCAAGTTGG CTCTATCTCT GCTAACTCAG ACACCAAAAT TGGTGAATTG ATTGCTCAAG CGATGGAAAA AGTCGGTAAG CAAGGTGTTA TAACGGTTGA AGAAGGTTCA AGCTTTGAAG ATACCTTGGA AGTTGTGGAA GGTATGCAGT TTGACCGTGG TTATATCAGC CCGTATTTTG CTAATAAGCA AGACAGCTTG ACCGCTGAGT TTGAAAACCC ATATATCTTG TTGGTTGACA AAAAAATCAG CAATATTCGC GAAATCGTGC CATTACTTGA GCAAGTCATG CAGCAGAGCA AGCCATTGCT AATCATCGCT GAAGACGTAG AAAACGAAGC ATTGGCTACC TTGGTTGTAA ACAACATGCG TGGCGGCTTA AAAACTTGTG CGGTAAAAGC ACCAGGTTTT GGCGATCGTC GTAAAGCAAT GCTAGAAGAT ATCGCAACTT TAACTGGCGG TACCGTTATC TCTGAAGAGA TTGGTTTAAG CCTTGAGACT GCAACTCTTG AGCAATTGGG TACGGCTAAG AAAGTCACTG TTGGTAAAGA AAATACCGTA ATCGTTGATG GCGCTGGTCA CTCTGCTGAT ATCGAAAACC GCGTTGAATC TATCCGTCGT CAAGTTGAAG AATCAACGTC TGACTATGAT AAAGAAAAGC TTCAAGAGCG TATGGCTAAA CTGGCTGGCG GCGTTGCCGT TATCAAAGTT GGCGCTGCGA CTGAAACTGA AATGAAAGAG AAGAAAGATC GCGTTGATGA TGCGCTACAT GCCACTCGTG CAGCGGTTGA AGAAGGCGTT GTCCCTGGTG GCGGTGTTGC CTTAGTTCGT GCGATGAATG CATTGTCTGA GCTACGTGGT GATAACGATG ACCAAAATGC TGGTATCAAT ATCTTACGTC GCGCAATGGA AGCTCCATTA CGTCAAATCG TTACTAACTC AGGCGAAGAA GCGTCAGTGG TAGTGAACGA AGTGAAGAGT GGCAGTGGTA ACTACGGTTA CAATGCGGCT TCTGGCGAAT ACGGCGATAT GCTAGAGATG GGTATTCTTG ACCCAGCTAA AGTAGCACGT TCAGCACTAG AAAATGCGGC ATCTGTTGCA GGCCTCATGC TAACAACTGA AGTCATGATT ACTGATTTAC CACAAGGTGA TGATGGTATG GCTGGCATGG GTGCTGGCGG TGGTATGGGC GGTATGGGCG GCATGATGTA A
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Protein sequence | MAKDVKFGID ARKQMMDGVN ILANAVRVTL GPKGRNVVID KSFGAPTITK DGVSVAKEIE LENKFENMGA QLVREVASRT NDVAGDGTTT ATVLAQSILQ EGMKSVAAGM NPMDLKRGID KAVRAAVEQI HLLSTPADDS KAIAQVGSIS ANSDTKIGEL IAQAMEKVGK QGVITVEEGS SFEDTLEVVE GMQFDRGYIS PYFANKQDSL TAEFENPYIL LVDKKISNIR EIVPLLEQVM QQSKPLLIIA EDVENEALAT LVVNNMRGGL KTCAVKAPGF GDRRKAMLED IATLTGGTVI SEEIGLSLET ATLEQLGTAK KVTVGKENTV IVDGAGHSAD IENRVESIRR QVEESTSDYD KEKLQERMAK LAGGVAVIKV GAATETEMKE KKDRVDDALH ATRAAVEEGV VPGGGVALVR AMNALSELRG DNDDQNAGIN ILRRAMEAPL RQIVTNSGEE ASVVVNEVKS GSGNYGYNAA SGEYGDMLEM GILDPAKVAR SALENAASVA GLMLTTEVMI TDLPQGDDGM AGMGAGGGMG GMGGMM
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