Gene Psyc_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0553 
SymbolgroEL 
ID3513980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp647289 
End bp648929 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content46% 
IMG OID637669238 
Productchaperonin GroEL 
Protein accessionYP_263848 
Protein GI71065121 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG ACGTAAAATT CGGCATTGAT GCCCGTAAAC AAATGATGGA CGGCGTAAAC 
ATTCTAGCAA ATGCAGTACG TGTAACCTTA GGACCTAAAG GTCGTAACGT GGTTATCGAT
AAATCATTTG GCGCGCCTAC CATCACTAAA GATGGTGTTT CGGTTGCCAA AGAAATCGAG
CTTGAAAACA AATTTGAAAA CATGGGTGCA CAACTTGTAC GTGAAGTTGC TAGCCGCACT
AATGATGTTG CTGGTGATGG TACAACCACT GCGACCGTAT TGGCTCAGTC AATCTTGCAA
GAAGGCATGA AATCAGTTGC CGCTGGCATG AACCCAATGG ATCTGAAACG CGGTATTGAT
AAAGCCGTGC GTGCTGCTGT TGAGCAAATC CATTTGCTAT CAACACCAGC TGATGATTCA
AAAGCGATTG CTCAAGTTGG CTCTATCTCT GCTAACTCAG ACACCAAAAT TGGTGAATTG
ATTGCTCAAG CGATGGAAAA AGTCGGTAAG CAAGGTGTTA TAACGGTTGA AGAAGGTTCA
AGCTTTGAAG ATACCTTGGA AGTTGTGGAA GGTATGCAGT TTGACCGTGG TTATATCAGC
CCGTATTTTG CTAATAAGCA AGACAGCTTG ACCGCTGAGT TTGAAAACCC ATATATCTTG
TTGGTTGACA AAAAAATCAG CAATATTCGC GAAATCGTGC CATTACTTGA GCAAGTCATG
CAGCAGAGCA AGCCATTGCT AATCATCGCT GAAGACGTAG AAAACGAAGC ATTGGCTACC
TTGGTTGTAA ACAACATGCG TGGCGGCTTA AAAACTTGTG CGGTAAAAGC ACCAGGTTTT
GGCGATCGTC GTAAAGCAAT GCTAGAAGAT ATCGCAACTT TAACTGGCGG TACCGTTATC
TCTGAAGAGA TTGGTTTAAG CCTTGAGACT GCAACTCTTG AGCAATTGGG TACGGCTAAG
AAAGTCACTG TTGGTAAAGA AAATACCGTA ATCGTTGATG GCGCTGGTCA CTCTGCTGAT
ATCGAAAACC GCGTTGAATC TATCCGTCGT CAAGTTGAAG AATCAACGTC TGACTATGAT
AAAGAAAAGC TTCAAGAGCG TATGGCTAAA CTGGCTGGCG GCGTTGCCGT TATCAAAGTT
GGCGCTGCGA CTGAAACTGA AATGAAAGAG AAGAAAGATC GCGTTGATGA TGCGCTACAT
GCCACTCGTG CAGCGGTTGA AGAAGGCGTT GTCCCTGGTG GCGGTGTTGC CTTAGTTCGT
GCGATGAATG CATTGTCTGA GCTACGTGGT GATAACGATG ACCAAAATGC TGGTATCAAT
ATCTTACGTC GCGCAATGGA AGCTCCATTA CGTCAAATCG TTACTAACTC AGGCGAAGAA
GCGTCAGTGG TAGTGAACGA AGTGAAGAGT GGCAGTGGTA ACTACGGTTA CAATGCGGCT
TCTGGCGAAT ACGGCGATAT GCTAGAGATG GGTATTCTTG ACCCAGCTAA AGTAGCACGT
TCAGCACTAG AAAATGCGGC ATCTGTTGCA GGCCTCATGC TAACAACTGA AGTCATGATT
ACTGATTTAC CACAAGGTGA TGATGGTATG GCTGGCATGG GTGCTGGCGG TGGTATGGGC
GGTATGGGCG GCATGATGTA A
 
Protein sequence
MAKDVKFGID ARKQMMDGVN ILANAVRVTL GPKGRNVVID KSFGAPTITK DGVSVAKEIE 
LENKFENMGA QLVREVASRT NDVAGDGTTT ATVLAQSILQ EGMKSVAAGM NPMDLKRGID
KAVRAAVEQI HLLSTPADDS KAIAQVGSIS ANSDTKIGEL IAQAMEKVGK QGVITVEEGS
SFEDTLEVVE GMQFDRGYIS PYFANKQDSL TAEFENPYIL LVDKKISNIR EIVPLLEQVM
QQSKPLLIIA EDVENEALAT LVVNNMRGGL KTCAVKAPGF GDRRKAMLED IATLTGGTVI
SEEIGLSLET ATLEQLGTAK KVTVGKENTV IVDGAGHSAD IENRVESIRR QVEESTSDYD
KEKLQERMAK LAGGVAVIKV GAATETEMKE KKDRVDDALH ATRAAVEEGV VPGGGVALVR
AMNALSELRG DNDDQNAGIN ILRRAMEAPL RQIVTNSGEE ASVVVNEVKS GSGNYGYNAA
SGEYGDMLEM GILDPAKVAR SALENAASVA GLMLTTEVMI TDLPQGDDGM AGMGAGGGMG
GMGGMM