Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0548 |
Symbol | |
ID | 3513975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 642397 |
End bp | 643974 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637669233 |
Product | tRNA-processing RNAse BN |
Protein accession | YP_263843 |
Protein GI | 71065116 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTTA TGGAAAATCT ATTAAAAAAA ATACCTTTTT TACACCAACG TTGGTTTCAG TTCTTACGTT TTTTGACACG GCACTTTTTT GAGGATAATT GTCAGCAAAA AGCTGCATCA CTGACCTATA CGACTTTGTT GTCGATTGTG CCTATCTTAA CCGTACTGTT GATGATTTTG TCTTCAGTAC CAGCACTTGC TTCTGTTAGA GCGCAGATTT ATGAAGTCAT TTATAGCAAC TTGCTGCCAC AATCGAGCTT ACAAGTCAGT AAATACATCA ATAATTTTGC TGAAAAATCA TCAAACCTAA CTATCATCGG GGCGATGTTC TTACTTTTTA CTACCATCAT GACTTTGACC ACCATTGAGC GCGCTTTTAA CCAAATATGG CGCGTAGAAG ATCGTTCTGG CGGTATGAGA AGTATGCTGC GCTATTGGAC CATCGTCACG TTGGGACCCT TGGTATTGGG TACGGCATTT ATCGCCTCAA GTGCTGTACA AAGCCTGAAT TTGTTAAATA GGCAAATTGG CGGCTATGGT ATTGACTGGT CGTTTTGGGT ACAGATAGTG TCGATTGCTG TTACGATCGC TGGTTTCATC AGTATGTATT GGTTTATTCC AAAAGCGCGA GTACCGGCAA AAAACGCCGC GATTGCGGGT GTTTTTGTGG CGATTGTCTT TGAGCTGATG AAGCACTTAT TTGGTACAGT GATGGCAAAT TTTACCAGTT ATGAGGCGAT TTATGGCGCA TTTGCGGCGC TGCCGATTTT CTTATTATGG ATATATCTGT CATGGAATCT AATTTTATTA GGAGTTGAGA TTAGCTATAC CTTAACCATA TTTGAGACAG AAGAGGTCTA TCCGCGCCAT CCGTTTTTAA GCTTGCTTGA TATGTTAAAC CTAGTTTATA CCTATCATTT AAAAGGCGAA GCGGTGAGCG AGCAAGCGCT ACGCAATGTT CTTGGACGTA AGGAGCTGCC AAAATGGTAT ACCTATATCA ACTACCTGCA AGACAGCAAC TTGATTACCA TGACAGAAGA TGAGCACTAC GTACTCAAAA GAGATTTGAG CAAAATAACC TTGTGGGATT TTTATCGTAC CCTGCCTTAT CCATTGCCTA TCAAAGATGA GCTTGATGAG ATGAGCCTAA AAGACCAAAA ACCTTGGCTT AGCTTATTGG TCAATCGCTT TGAAAATACC GAAGCCTATG CCAAAGCACA ATTGAATGTG CCACTCGGTG CTATTTTTGC TCATAGTGAA CCACGCAAAA AATCTGCTAA TGACAAATCG ACTAATCATA AAAATGAAAA GCTTCAGAAA GAGAAAAATG AATTCTTTAG AAAATCTAGC GCGGCTACCT CCAGTTATTT ATTACAAGAG CCTCTAGATA ATAAGGATGA TATACCGAAG TTTGAACCGG TCGCCTATGA CAAGGATAGC GACATAGAAC GTGATGAACA TAATCGTGAA ATTCTTATTC CACAAGACAG CGATGATGAT AAAAACCAAG TAGACGCTAA TCACTTCAAT GCTAAAGGCG ATATTATTAC AGAAGCTGAT AATCCAAGCT CGATTTGA
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Protein sequence | MVVMENLLKK IPFLHQRWFQ FLRFLTRHFF EDNCQQKAAS LTYTTLLSIV PILTVLLMIL SSVPALASVR AQIYEVIYSN LLPQSSLQVS KYINNFAEKS SNLTIIGAMF LLFTTIMTLT TIERAFNQIW RVEDRSGGMR SMLRYWTIVT LGPLVLGTAF IASSAVQSLN LLNRQIGGYG IDWSFWVQIV SIAVTIAGFI SMYWFIPKAR VPAKNAAIAG VFVAIVFELM KHLFGTVMAN FTSYEAIYGA FAALPIFLLW IYLSWNLILL GVEISYTLTI FETEEVYPRH PFLSLLDMLN LVYTYHLKGE AVSEQALRNV LGRKELPKWY TYINYLQDSN LITMTEDEHY VLKRDLSKIT LWDFYRTLPY PLPIKDELDE MSLKDQKPWL SLLVNRFENT EAYAKAQLNV PLGAIFAHSE PRKKSANDKS TNHKNEKLQK EKNEFFRKSS AATSSYLLQE PLDNKDDIPK FEPVAYDKDS DIERDEHNRE ILIPQDSDDD KNQVDANHFN AKGDIITEAD NPSSI
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