Gene Psyc_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0546 
Symbol 
ID3513973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp639265 
End bp640539 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content44% 
IMG OID637669231 
ProductCPA1 family Na(+)/H(+) antiporter 
Protein accessionYP_263841 
Protein GI71065114 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCTA CGAGCAGCCT GACCATACTC GAAATCAGCG CGATATTTTT ATCCATCACT 
GCCCTATTGA CTTACGTTAA TCATCGATTT ATTGGACTAC CGACGACCAT TGGTGTGATG
GTTATCTCTA TATTATTGTC TATTGGGGCG ATATTTTTAG GGTTGTTAGG GTTTGATCAG
CTCATTGATT ATGAGATCAG TTTATTAGGG CAGCTTGATT TTACTGAAGT CTTACTAGAT
GGCATGCTCT CTATGCTTTT ATTTGCTGCC GCTTTGCACG TCAATATTGG TGATCTAAAA
CGTTATAAGC TGCCCATTGG TATTCTAGCC TTTATCGGTA CCTTAGTGTC AGCGCTGCTG
ATTGCCGTCG CTCTATATCT GATGTTGCCA TTATTTGGTT TTGAGCTCTC TTTTTTGTGG
TGCTTACTGT TTGGCGCTTT GATATCTCCA ACCGACCCTA TTGCAGTGAT GGGCATTTTA
GCGTCTGCTG GCGCACCAAA AAGCATAGAA ACGGTCATCG CTGGCGAATC GCTATTTAAC
GATGGTATCG GCGTCGTCAT CTTTGTACTG CTGCTCGGTA TTTTATCGAG CGGTGATATT
CCCACCGCTA ATTATGTGGC GCATACCTTG GCAGTTGAAG CTGGTGGCGG TATTGTCTTT
GGTTTAGTAC TTGGCGCAAT TTTATATTAC ATGCTCAAAA GCATTGATAG CTATCAAGAA
GAGGTTTTGC TGACACTTGC AGGGGTGATA GGCGGCTATG AGCTAGCCAG TCATTGGCAT
TTATCAGGAC CACTAGCAAT GGTAATGATG GGGCTGATGC TGGGCAATCG AGGACGAGCA
CTAGCGATGA GTGATAAGAC GCGCCATTAT GTCGATTTGT TTTGGGAATT GATCGATGAG
ATTTTAAACG CAATTTTATT TGTATTAATC GGTCTTGAAG TGGTAATGAT TGCTTATTCA
GCCAATTTAT TTATCGCTGG AGCTTTAACG ATTGTTATTG CCCTACTTGC TCGATTTATT
GTGGTCGGCA TGACCACCAA GACCTTTCAT CGGCAGCTTG ACTTGCCAGC AGGCGCTTGG
AAGGTGCTAA CATGGGGTGG ACTACGAGGC GGCATTTCGG TCGCTTTAGT ATTGCAACTG
CCTACAGGAT CAGAGCGCGA TATACTATTG GCGCTGACTT ATGCGGTGGT TATATTCTCT
ATCTTGGTAC AAGGGTTAAG TGTAGGTAAA GTCGCTAAAA GCATTGGTAC GGATAAAAAA
ACAGTAGAGA TATAA
 
Protein sequence
MDPTSSLTIL EISAIFLSIT ALLTYVNHRF IGLPTTIGVM VISILLSIGA IFLGLLGFDQ 
LIDYEISLLG QLDFTEVLLD GMLSMLLFAA ALHVNIGDLK RYKLPIGILA FIGTLVSALL
IAVALYLMLP LFGFELSFLW CLLFGALISP TDPIAVMGIL ASAGAPKSIE TVIAGESLFN
DGIGVVIFVL LLGILSSGDI PTANYVAHTL AVEAGGGIVF GLVLGAILYY MLKSIDSYQE
EVLLTLAGVI GGYELASHWH LSGPLAMVMM GLMLGNRGRA LAMSDKTRHY VDLFWELIDE
ILNAILFVLI GLEVVMIAYS ANLFIAGALT IVIALLARFI VVGMTTKTFH RQLDLPAGAW
KVLTWGGLRG GISVALVLQL PTGSERDILL ALTYAVVIFS ILVQGLSVGK VAKSIGTDKK
TVEI